Author

C. Cruaud

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Ecology· 1 Microbiology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:metagenomics· 2 Research Focus:clustering· 1 Approach:comparative / phylogenetic analysis· 1

Frequent Co-Authors

J.-M. Aury· 3 shared C. Da Silva· 2 shared E. Pelletier· 2 shared O. Jaillon· 2 shared P. Wincker· 2 shared A. Coeur d'acier· 1 shared A. Fernandez Guerra· 1 shared A. Geraci· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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3 shared papersEvolutionary Biology

J.-M. Aury

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Author profile →

5 papers

Recent·Most cited

Discordance between phylogenomic datasets in aphids: who is telling the truth?

E. Jousselin, A. Coeur d'acier, A.-l. Clamens, M. Galan, C. Cruaud, V. Barbe, A. Manzano-Marin

This study analyzes discordant phylogenomic data from aphids to resolve their evolutionary history, finding monophyly of subfamilies but unresolved relationships between them.

bioRxiv · Apr 12, 2024Evolutionary Biology

Plant genetic bases explaining microbiota diversity shed light into a novel holobiont generalist gene theory

L. Maillet, M. Norest, A. Kautsky, A. Geraci, E. Oddo, A. Troia, A.-Y. GUILLERM-ERCKELBOUDT, C. Falentin, M. Rousseau-Gueutin, A.-M. Chevre, B. Istace, C. Cruaud, C. Belser, J.-M. Aury, R. Schicchi, , C. Bartoli

The paper identifies 13 genes in Brassica rapa that regulate microbiota diversity across fungal and bacterial communities, supporting the hologenome theory of evolution.

bioRxiv · Dec 22, 2023 · PreprintEvolutionary Biology

Large-scale transcriptomics to dissect two years of the life of a fungal phytopathogen interacting with its host plant

E. J. Gay, J. L. Soyer, N. Lapalu, J. Linglin, I. Fudal, C. Da Silva, P. Wincker, J.-M. Aury, C. Cruaud, A. Levrel, J. Lemoine, R. Delourme, T. Rouxel, M.-H. Balesdent

This paper uses large-scale transcriptomics to analyze the gene expression of Leptosphaeria maculans over two years of interaction with its host plant, identifying 9% of genes involved in infection stages and revealing their chromatin localization.

BMC Biology · Mar 23, 2021Peer-reviewedPathology

Functional repertoire convergence of distantly related eukaryotic plankton lineages revealed by genome-resolved metagenomics

T. O. Delmont, M. Gaia, D. D. Hinsinger, P. Fremont, C. Vanni, A. Fernandez Guerra, A. M. Eren, A. Kourlaiev, L. d'Agata, Q. Clayssen, E. Villar, K. Labadie, C. Cruaud, J. Poulain, C. Da Silva, , O. Jaillon

The paper uses Tara Oceans metagenomic data to reconstruct and analyze eukaryotic genomes, revealing functional convergence among distantly related plankton lineages.

bioRxiv · Oct 15, 2020 · PreprintMicrobiology

Evolutionary diversification of tiny ocean predators

F. Latorre, I. M. Deutschmann, A. Labarre, A. Obiol, A. K. Krabberod, E. Pelletier, M. E. Sieracki, C. Cruaud, O. Jaillon, R. Massana, R. Logares

This study examines four related marine picoeukaryotic predators, showing they have distinct genomic features and ecological adaptations that influence their coexistence and distribution.

bioRxiv · Oct 9, 2020Ecology