Enabling metagenomic surveillance for bacterial tick-borne pathogens using nanopore sequencing with adaptive sampling
E. J. Kipp, L. L. Lindsey, B. S. Khoo, C. Faulk, J. D. Oliver, P. A. Larsen
This paper demonstrates the use of nanopore adaptive sampling to selectively sequence bacterial tick-borne pathogens from Ixodes scapularis ticks, increasing targeted pathogen sequences by two-fold.
bioRxiv · Aug 17, 2021 · PreprintMicrobiology