Author

C. M. Small

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Organism:zebrafish· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Research Focus:host-pathogen & immune response· 2 Assay:metagenomics· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

W. A. Cresko· 4 shared S. Bassham· 3 shared E. A. Beck· 2 shared B. Hung· 1 shared C. B. Kimmel· 1 shared D. Kent· 1 shared E. G. Cytrynbaum· 1 shared H. B. Penn· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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4 shared papersEvolutionary Biology

W. A. Cresko

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Author profile →

5 papers

Recent·Most cited

Single Cell Sequencing Provides Clues about the Developmental Genetic Basis of Evolutionary Adaptations in Syngnathid Fishes

H. M. Healey, H. B. Penn, C. M. Small, S. Bassham, V. Goyal, M. A. Woods, W. A. Cresko

The paper uses single-cell RNA sequencing to analyze developmental genetic changes in Gulf pipefish embryos, identifying cell types and gene networks associated with evolutionary traits like toothlessness and dermal armor.

bioRxiv · Apr 8, 2024Evolutionary Biology

Host genomic variation shapes gut microbiome diversity in threespine stickleback fish

C. M. Small, E. A. Beck, M. C. Currey, H. F. Tavalire, S. Bassham, W. A. Cresko

This study shows that host genetic variation influences gut microbiome diversity in threespine stickleback fish using a common garden experiment and genome-wide analysis.

bioRxiv · Nov 14, 2022Evolutionary Biology

Candidate Genes Underlying Wolbachia-Associated Plastic Recombination Revealed by Ovarian Transcriptomics of D. melanogaster

S. I. Franz, C. M. Small, W. A. Cresko, N. D. Singh

This study identifies candidate genes associated with Wolbachia-induced plastic recombination in D. melanogaster using ovarian transcriptomics.

bioRxiv · Apr 28, 2022 · PreprintEvolutionary Biology

Highly reproducible 16S sequencing facilitates measurement of host genetic influences on the stickleback gut microbiome

C. M. Small, M. Currey, E. A. Beck, S. Bassham, W. A. Cresko

The paper evaluates how tissue preparation and DNA isolation affect 16S sequencing of stickleback gut microbiomes, finding minor protocol effects compared to host genetic influences.

bioRxiv · Dec 17, 2018Microbiology

Developmental tuning of mineralization drives morphological diversity of gill cover bones in sculpins and their relatives

E. G. Cytrynbaum, C. M. Small, R. Y. Kwon, B. Hung, D. Kent, Y.-l. Yan, M. L. Knope, R. A. Bremiller, T. Desvignes, C. B. Kimmel

The paper investigates how developmental regulation of bone mineralization contributes to morphological diversity in gill cover bones of sculpins and their relatives.

bioRxiv · Oct 8, 2018Evolutionary Biology