Author

Chengkai Yang

Georgia Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Organism:bacteria (other)· 1 Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:cryo-EM· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Dongsheng LeiiD· 1 shared Feng JiaoiD· 1 shared Fulin YangiD· 1 shared Guozhi JiangiD· 1 shared Hanzhong Feng· 1 shared Hongkun Zhang· 1 shared Jianshe Yu· 1 shared Jun Hou· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBiophysics

Dongsheng LeiORCID

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Author profile →

3 papers

Recent·Most cited

Using the simple telegraph model to decipher transcriptional burst regulation across genome-wide data

Liang Chen, Yuwen Wu, Chengkai Yang, Sijia Fang, Yu Liao, Yueheng Wu, Hongkun Zhang, Guozhi Jiang, Jianshe Yu, Feng Jiao

The paper uses a simplified telegraph model to analyze transcriptional burst regulation in scRNA-seq and smFISH data, revealing key regulatory patterns in mouse and human tissues.

iScience · Aug 21, 2026Peer-reviewedMolecular Biology

Structural basis for repurposing a flexible phage tail into an Intraspecific bacterial competition weapon

Fulin Yang, Zelin Zhang, Chengkai Yang, Jun Hou, Hanzhong Feng, Dongsheng Lei, Yong‐Xing He

This paper determines the high-resolution structure of an F-type tailocin, revealing its assembly mechanism and specialized tail-fiber architecture for bacterial competition.

bioRxiv · Feb 24, 2026 · PreprintBiophysics

Learning latent embedding of multi-modal single cell data and cross-modality relationship simultaneously

Ziqi Zhang, Chengkai Yang, Xiuwei Zhang

The paper introduces scDART, a deep learning framework that integrates scRNA-seq and scATAC-seq data and learns cross-modal relationships for trajectory inference.

Genome biology · Jun 27, 2022Peer-reviewedBioinformatics