Author

Chi Xu

University of Oslo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Biswajyoti SahuiD· 2 shared Liangru FeiiD· 2 shared Samuele CancellieriiD· 2 shared Caroline Sophie VerbekeiD· 1 shared Celina Wiik· 1 shared Denghui LiuiD· 1 shared Deyong WangiD· 1 shared Divyesh PateliD· 1 shared

Activity by Year

2020-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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2 shared papersCancer Biology

Biswajyoti SahuORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

NFATC2 in pancreatic cancer-associated fibroblasts predicts treatment response and facilitates ERBB-targeted therapies

JIAHAO GUO, Samuele Cancellieri, Chi Xu, Celina Wiik, Liangru Fei, Shiva Dahal‐Koirala, Emma Maria Haapaniemi, Tero A. Aittokallio, Caroline Sophie Verbeke, Biswajyoti Sahu

The paper identifies NFATC2-expressing cancer-associated fibroblasts in PDAC that improve treatment response and enhance ERBB-targeted therapies.

bioRxiv · Apr 8, 2026 · PreprintCancer Biology

Classical enhancers couple cis-regulatory logic with transcriptional condensates and 3D genome architecture

Ville Tiusanen, Divyesh Patel, Jihan Xia, Chi Xu, Subhamoy Datta, Ji Weon Yun, Samuele Cancellieri, Liangru Fei, Mehmet Yilmaz, Esa Pitkänen, Stefan Preković, Päivi Pihlajamaa, Biswajyoti Sahu

The paper shows classical enhancers influence 3D genome structure by linking DNA sequence to transcriptional condensates and chromatin organization through specific transcription factors.

bioRxiv · Jan 23, 2026 · PreprintGenomics

AutoGenome V2: New Multimodal Approach Developed for Multi-Omics Research

Chi Xu, Denghui Liu, Lei Zhang, Zhimeng Xu, Wenjun He, Deyong Wang, Mingyue Zheng, Nan Qiao

AutoGenome V2 integrates multi-omics data using a novel multimodal deep learning approach, achieving state-of-the-art results in four tasks.

bioRxiv · Apr 2, 2020 · PreprintBioinformatics