Author

David Hall

Children's Oncology GroupPrimary ORCID profile (0000-0001-8152-2713 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

David HalliD1 paper · Forestry Research Institute of Sweden

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Organism:C. elegans· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:large language model· 1

Frequent Co-Authors

Donald A. BarkauskasiD· 2 shared Subhash RamakrishnaniD· 2 shared Alyaa Al‐IbraheemiiD· 1 shared Amy Yu· 1 shared Angela KimiD· 1 shared Anna FoulgeriD· 1 shared Anna L Coleman-HulbertiD· 1 shared Ayesha BatooliD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersCancer Biology

Donald A. BarkauskasORCID

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3 papers

Recent·Most cited

NAPRT expression and epigenetic regulation in pediatric rhabdomyosarcoma as a potential biomarker for NAMPT inhibition

Angela Kim, Prateek Bhardwaj, Collin D. Heer, Sophia J. Zhao, Karlie N. Lucas, Katelyn J. Noronha, Sam Friedman, Raffaella Morotti, Ranjini K. Sundaram, Shahyan Rehman, Deepti Bhatt, Filemon S. Dela Cruz, Tamar Y. Feinberg, Subhash Ramakrishnan, Wei Xue, , Juan C. Vasquez

This study evaluates NAPRT expression and epigenetic regulation in pediatric rhabdomyosarcoma as a potential biomarker for NAMPT inhibitor therapy.

Molecular Cancer Therapeutics · Apr 22, 2026Peer-reviewedCancer Biology

Leveraging Large Language Models to Extract Prognostic Pathology Features in Ewing Sarcoma

Jingwei Huang, Ayesha Batool, Zifan Gu, Zhuo Zhao, Bo Yao, Jennifer O. Black, Jessica L. Davis, Alyaa Al‐Ibraheemi, Steven DuBois, Donald A. Barkauskas, Subhash Ramakrishnan, David Hall, Patrick Joseph Grohar, Yang Xie, Guanghua Xiao, Patrick J. Leavey

This paper uses large language models to extract prognostic histologic features from Ewing sarcoma pathology reports, identifying NSE and S100 as significant biomarkers.

bioRxiv · Mar 19, 2026 · PreprintBioinformatics

Computer prediction and genetic analysis identifies retinoic acid modulation as a driver of conserved longevity pathways in genetically-diverse Caenorhabditis nematodes

Stephen A. Banse, Christine A. Sedore, Anna L Coleman-Hulbert, Erik Johnson, Brian Onken, David Hall, Erik Segerdell, E Grace Jones, Yuhua Song, Hadley Osman, Jian Xue, Elena Battistoni, Suzhen Guo, Anna Foulger, Madhuri Achanta, , Patrick C. Phillips

The paper identifies retinoic acid modulation as a driver of longevity pathways in C. elegans using computational predictions and genetic analysis of 16 compounds.

eLife · Dec 23, 2025Peer-reviewedGenetics