Author

Devin K. Porter

Predictive Biology (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Assay:long-read sequencing· 1 Organism:mouse· 1

Frequent Co-Authors

Alexander R. StantoniD· 1 shared Alison H. HarrilliD· 1 shared Anne CzechanskiiD· 1 shared Candice ByersiD· 1 shared Catrina A. SpruceiD· 1 shared Chris Olivier· 1 shared Christopher L. BakeriD· 1 shared Daniel A. SkellyiD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Alexander R. StantonORCID

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2 papers

Recent·Most cited

Ultra-low input single tube linked-read library method enables short-read NGS systems to generate highly accurate and economical long-range sequencing information for de novo genome assembly and haplotype phasing

Zhoutao Chen, Long Pham, Tsai-Chin Wu, Guoya Mo, Yu Xia, Peter L. Chang, Devin K. Porter, Tấn Đức Phan, Huu Che, Hao Tran, Vikas Bansal, Justin P. Shaffer, Pedro Belda‐Ferre, Greg C. Humphrey, Rob D. Knight, , Ming Lei

The paper introduces a low-cost, high-accuracy method for generating long-range sequencing data using short-read NGS systems, enabling de novo genome assembly and haplotype phasing with minimal DNA input.

Genome Research · Jun 1, 2020Peer-reviewedGenomics

Genetic variation influences pluripotent ground state stability in mouse embryonic stem cells through a hierarchy of molecular phenotypes

Daniel A. Skelly, Anne Czechanski, Candice Byers, Selcan C. Aydin, Catrina A. Spruce, Chris Olivier, Kwangbom Choi, Daniel M. Gatti, Narayanan Raghupathy, Alexander R. Stanton, Matthew J. Vincent, Stephanie Dion, Ian Greenstein, Matthew T Pankratz, Devin K. Porter, , Laura G. Reinholdt

The paper identifies genetic variants influencing metastability in mouse embryonic stem cells by analyzing gene expression and chromatin accessibility in 185 genetically diverse cells.

bioRxiv · Feb 17, 2019 · PreprintGenomics