Author

E. Withnell

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 2 Organism:human· 2 Assay:spatial transcriptomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

G. Malagoli Tagliazucchi· 2 shared M. Secrier· 2 shared A. J. Wiecek· 1 shared M. Parreno-Centeno· 1 shared S. Pan· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 8 mutual co-author links

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2 shared papersCancer Biology

G. Malagoli Tagliazucchi

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2 papers

Recent·Most cited

A deep learning and graph-based approach to characterise the immunological landscape and spatial architecture of colon cancer tissue

M. Parreno-Centeno, G. Malagoli Tagliazucchi, E. Withnell, S. Pan, M. Secrier

This paper develops a deep learning and graph-based method to analyze colon cancer tissue, identifying immune patterns and structural biomarkers from H&E slides.

bioRxiv · Jul 6, 2022 · PreprintCancer Biology

Genomic and local microenvironment effects shaping epithelial-to-mesenchymal trajectories in cancer

G. Malagoli Tagliazucchi, A. J. Wiecek, E. Withnell, M. Secrier

The paper identifies three EMT macro-states in cancer tumors and shows their association with genomic features and microenvironment interactions.

bioRxiv · Jul 23, 2021 · PreprintCancer Biology