Author

F. Simon

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biophysics· 2 Cancer Biology· 1 Cell Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell signaling & trafficking· 4 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Approach:deep learning· 2 Approach:experimental assay· 2 Research Focus:trajectory inference· 2 Organism:bacteria (other)· 1

Frequent Co-Authors

E. Dultz· 2 shared J. Zsok· 2 shared L. E. Weiss· 2 shared S. van Teeffelen· 2 shared A. Vigouroux· 1 shared A. Wolstenholme· 1 shared B. Cordier· 1 shared C. Boudoux· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersCell Biology

E. Dultz

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Nuclear basket proteins regulate the distribution and mobility of nuclear pore complexes in budding yeast

J. Zsok, F. Simon, G. Bayrak, L. Isaki, N. Kerff, Y. Kicheva, A. Wolstenholme, L. E. Weiss, E. Dultz

The paper investigates the role of nuclear basket proteins in NPC distribution and mobility in budding yeast, showing their stable association and exclusion of NPCs from the nucleolar region.

Molecular Biology of the Cell · Nov 1, 2024Peer-reviewedCell Biology

Detecting directed motion and confinement in single-particle trajectories using hidden variables

F. Simon, G. Ramadier, I. Fonquernie, J. Zsok, S. Patskovsky, M. Meunier, C. Boudoux, E. Dultz, L. E. Weiss

This paper introduces aTrack, a tool for classifying single-particle motion as Brownian, confined, or directed, and demonstrates its application in cellular and biosensing contexts.

bioRxiv · Apr 18, 2024Biophysics

ExTrack characterizes transition kinetics and diffusion in noisy single-particle tracks

F. Simon, J.-Y. Tinevez, S. van Teeffelen

ExTrack analyzes noisy single-particle tracks to characterize transition kinetics and diffusion by using probabilistic modeling of spatio-temporal data.

bioRxiv · Jul 13, 2022Biophysics

Partial epithelial-to-mesenchymal transition is prognostic and associates with Slug in head and neck cancer

H. Schinke, M. Pan, M. Akyol, G. Kranz, D. Libl, F. Simon, M. Canis, P. Baumeister, O. Gires

The paper identifies a partial epithelial-to-mesenchymal transition (p-EMT) signature in HNSCC linked to poor prognosis and Slug expression, showing its clinical relevance and mechanistic role in therapy resistance.

bioRxiv · Oct 20, 2020 · PreprintCancer Biology

Transpeptidase PBP2 governs initial localization and activity of major cell-wall synthesis machinery in Escherichia coli

E. Wollrab, G. Ozbaykal, A. Vigouroux, B. Cordier, F. Simon, T. Chaze, M. Matondo, S. van Teeffelen

This study shows PBP2 initiates Rod complexes in E. coli by binding cell wall, not MreB or curvature, and limits Rod complex activity.

bioRxiv · Jul 28, 2019Microbiology