Author

Hannah Kim

Columbia University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Neuroscience· 2 Synthetic Biology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 4 Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:drug response / drug discovery· 2 Assay:electronic health records· 2 Assay:CRISPR screen· 1 Approach:deep learning· 1 Organism:human· 1

Frequent Co-Authors

Courtney CokeriD· 2 shared Jongwon ImiD· 2 shared Tal DaninoiD· 2 shared Xiaoyu Hu· 2 shared 진하영· 2 shared Adam Honig-FrandiD· 1 shared Anton NekrutenkoiD· 1 shared Arjun Rohit AdapaiD· 1 shared

Activity by Year

2023-2026 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersSynthetic Biology

Courtney CokerORCID

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Expanding the therapeutic window of bacteria for cancer therapy

Jongwon Im, Meghna Komaranchath, Sophia Xi Windemuth, Hannah Kim, Xiaoyu Hu, Arjun Rohit Adapa, Myra Ashraf, Katherine A. Cummins, Courtney Coker, YoungUk Jang, 진하영, Kam W. Leong, Ronny Drapkin, Jeffrey N. Bruce, Peter Canoll, Tal Danino

This paper develops a tumor-targeting engineered bacterium that improves therapeutic efficacy and safety in cancer treatment.

bioRxiv · Oct 29, 2026 · PreprintSynthetic Biology

Engineered probiotics target granulomas to treat mycobacterial infection

Yu-Yu Chen, Tetsuhiro Harimoto, Gaëlle Guiewi Makafe, Courtney Coker, Hannah Kim, Jongwon Im, Yuanqi Jing, 진하영, Xiaoyu Hu, Sharicka Zutshi, Mia Ross Raneri, Brian C. Weinrick, Tal Danino

This paper engineers probiotic bacteria to target granulomas and reduce mycobacterial infection in vitro and in vivo.

bioRxiv · Oct 29, 2026 · PreprintSynthetic Biology

Characterizing Physicochemical Selection in Protein Evolution with Property-Informed Models (PRIME)

Hannah Kim, Konrad Scheffler, Anton Nekrutenko, Darren Patrick Martin, Steven Weaver, Ben Murrell, Sergei L. Kosakovsky Pond

PRIME models physicochemical selection in protein evolution by incorporating biophysical properties, improving model fit and revealing adaptive tuning mechanisms in protein structures.

bioRxiv · Mar 11, 2026 · PreprintEvolutionary Biology

Complementary cortical and thalamic contributions to cell-type-specific striatal activity dynamics during movement

Enida Gjoni, Ram Dyuthi Sristi, H. C. Liu, Shahar Dror, Xinlei Lin, Keelin O’Neil, Oscar M. Arroyo, Sun Woo Hong, Hannah Kim, Jeffrey Liu, Sonja Blumenstock, Byung Kook Lim, Gal Mishne, Takaki Komiyama

The paper identifies cell-type-specific activity dynamics in striatal neurons during movement by analyzing cortical and thalamic inputs in mice.

Science Advances · Jan 28, 2026Peer-reviewedNeuroscience

Regulation of stress-induced sleep fragmentation by preoptic glutamatergic neurons

Jennifer Smith, Adam Honig-Frand, Hanna Antila, Ashley Choi, Hannah Kim, Kevin Thomas Beier, Franz Weber, Shinjae Chung

This study identifies POA glutamatergic neurons as regulators of stress-induced sleep fragmentation through optogenetic manipulation and calcium activity analysis in mice.

Current Biology · Dec 13, 2023Peer-reviewedNeuroscience