Author

J. A. Bubis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:proteomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. A. Lobas· 1 shared B. Delanghe· 1 shared E. Damoc· 1 shared E. M. Solovyeva· 1 shared F. Kjeldsen· 1 shared H. Kagawa· 1 shared I. A. Tarasova· 1 shared J. Slovakova· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBiochemistry

A. A. Lobas

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Author profile →

2 papers

Recent·Most cited

Challenging the Astral mass analyzer - up to 5300 proteins per single-cell at unseen quantitative accuracy to study cellular heterogeneity.

J. A. Bubis, T. N. Arrey, E. Damoc, B. Delanghe, J. Slovakova, T. M. Sommer, H. Kagawa, P. Pichler, N. C. Rivron, K. Mechtler, M. Matzinger

This paper introduces a high-throughput single-cell proteomics workflow achieving 5300 protein groups per cell with high accuracy, enabling the study of cellular heterogeneity and lineage differentiation.

bioRxiv · Feb 1, 2024 · PreprintBiochemistry

DirectMS1: MS/MS-free identification of 1000 proteins of cellular proteomes in 5 minutes

M. V. Ivanov, J. A. Bubis, V. Gorshkov, I. A. Tarasova, L. I. Levitsky, A. A. Lobas, E. M. Solovyeva, M. L. Pridatchenko, F. Kjeldsen, M. V. Gorshkov

DirectMS1 identifies 1000 protein groups from HeLa cells in 5 minutes without MS/MS, showing higher sensitivity and sequence coverage than standard MS/MS-based methods.

bioRxiv · Sep 5, 2019Biochemistry