Author

J. Stam

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Organism:human· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1

Frequent Co-Authors

F. Lebreton· 3 shared J. W. Bennett· 3 shared B. T. Jones· 2 shared B. W. Corey· 2 shared E. G. Mills· 2 shared E. Snesrud· 2 shared L. R. Hall· 2 shared M. J. Martin· 2 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

F. Lebreton

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Detecting, mapping, and suppressing the spread of a decade-long Pseudomonas aeruginosa nosocomial outbreak with genomics

W. Stribling, L. R. Hall, A. Powell, C. Harless, M. J. Martin, B. W. Corey, E. Snesrud, A. Ong, R. Maybank, J. Stam, K. Bartlett, B. T. Jones, L. N. Preston, K. F. Lane, B. Thompson, , F. Lebreton

This study uses genomics to trace a long-term Pseudomonas aeruginosa hospital outbreak, identifies transmission routes, and shows how infection control measures reduced spread.

bioRxiv · Jul 24, 2023 · PreprintMicrobiology

Anatomy of an Extensively Drug Resistant Klebsiella pneumoniae Outbreak in Tuscany, Italy

M. J. Martin, B. W. Corey, F. Sannio, L. R. Hall, U. MacDonald, B. T. Jones, E. G. Mills, J. Stam, R. Maybank, Y. Kwak, K. Schaufler, K. Becker, N. O. Hubner, S. Cresti, G. Tordini, , J.-D. Docquier

This study tracks an NDM-producing K. pneumoniae outbreak in Italy, identifying a high-risk clone with multidrug resistance and a hybrid plasmid linked to hypervirulence.

bioRxiv · Jun 2, 2021Microbiology

A Panel of Diverse Pseudomonas aeruginosa Clinical Isolates for Research and Development

F. Lebreton, E. Snesrud, L. Hall, E. G. Mills, M. R. Galac, J. Stam, A. C. Ong, R. A. Maybank, Y. I. Kwak, S. Johnson, M. Julius, B. E. Swierczewski, P. E. Waterman, M. K. Hinkle, A. R. Jones, , P. McGann

The paper describes a panel of 100 diverse Pseudomonas aeruginosa clinical isolates selected to represent genetic and antibiotic susceptibility diversity for research and development.

bioRxiv · Apr 23, 2021Microbiology