Author

Jan Armida

University of Lausanne

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:Drosophila· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Richard BentoniD· 2 shared Ali SaadatiD· 1 shared Chih‐Ying SuiD· 1 shared D. Sean FroeseiD· 1 shared David Hans-Ulrich Haerry· 1 shared Dylan LawlessiD· 1 shared J. Roman ArguelloiD· 1 shared Jacques FellayiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersNeuroscience

Richard BentonORCID

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Author profile →

3 papers

Recent·Most cited

Application of qualifying variants for genomic analysis

Dylan Lawless, Ali Saadat, Mariam Ait Oumelloul, Simon Boutry, Veronika Stadler, Sabine Oesterle, Jan Armida, David Hans-Ulrich Haerry, D. Sean Froese, Luregn Jan Schlapbach, Jacques Fellay

The paper introduces a framework for defining and reusing qualifying variants (QVs) in genomic analysis to improve transparency, reproducibility, and interoperability across pipelines.

Bioinformatics · Jan 21, 2026Peer-reviewedGenetic & Genomic Medicine

Comparative transcriptomics of the Drosophila olfactory subsystems identifies a support cell-expressed Osiris protein required for pheromone sensing

Marta Scalzotto, Renny Ng, Steeve Cruchet, Michael Saina, Jan Armida, Chih‐Ying Su, Richard Benton

The paper identifies a support cell-expressed protein, Osi8, essential for pheromone sensing in Drosophila by analyzing transcriptomic data of olfactory subsystems.

BMC Biology · Oct 10, 2022Peer-reviewedNeuroscience

Targeted molecular profiling of rare cell populations identifies olfactory sensory neuron fate and wiring determinants

J. Roman Arguello, Liliane Abuin, Jan Armida, Kaan Mika, Phing Chian Chai, Richard Benton

The paper uses Targeted DamID to profile rare Drosophila sensory neurons, identifying transcription factors and guidance molecules involved in neuron fate and wiring.

eLife · Mar 5, 2021Peer-reviewedNeuroscience