Author

Ji Yu

UConn Health

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Assay:imaging· 1 Organism:rat· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Charles W Wolgemuth· 1 shared Igor L Novak· 1 shared Leslie M Loew· 1 shared Nadia Efimova· 1 shared Olena O Marchenko· 1 shared Sulagna Das· 1 shared Tatiana Svitkina· 1 shared Vladimir I Rodionov· 1 shared

Activity by Year

2017-2024 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBiophysics

Charles W Wolgemuth

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2 papers

Recent·Most cited

Chioso: Segmentation-free Annotation of Spatial Transcriptomics Data at Sub-cellular Resolution via Adversarial Learning

Ji Yu

Chioso transfers cell-level labels from single-cell RNA sequencing to spatial transcriptomics data at sub-cellular resolution without requiring segmentation.

bioRxiv · Jun 3, 2024 · PreprintBioinformatics

Actomyosin Dynamics Determine the Extension and Retraction of Filopodia on Neuronal Dendrites

Olena O Marchenko, Sulagna Das, Ji Yu, Igor L Novak, Vladimir I Rodionov, Nadia Efimova, Tatiana Svitkina, Charles W Wolgemuth, Leslie M Loew

The paper shows that actomyosin dynamics explain filopodia extension and retraction in neurons through a model validated by experimental perturbations.

Molecular Biology of the Cell · Apr 15, 2017Peer-reviewedBiophysics