Author

Jiahui Zhang

Shanghai Artificial Intelligence Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioengineering· 1 Biophysics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Assay:imaging· 1 Organism:mouse· 1

Frequent Co-Authors

Guo Lu· 1 shared Jia-Qi Guan· 1 shared Jiamin WuiD· 1 shared Jiulin DuiD· 1 shared Jiyang YuiD· 1 shared Jiyuan YangiD· 1 shared John B. EastoniD· 1 shared Junmin PengiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioengineering

Guo Lu

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Author profile →

3 papers

Recent·Most cited

NeuroPack: Advanced Learnable Packaging Toolkit Towards Ultra-High Compression Ratio for Volumetric Neuroimaging

Runkai Zhao, Yang Xiaoxuan, Jiamin Wu, Qihao Zheng, Jiahui Zhang, Jia-Qi Guan, Weidong Cai, Jiulin Du, Lei Bai, Xu-Fei Du, Wanli Ouyang, Guo Lu, Song Chunfeng

NeuroPack compresses 3D neuroimaging data with high fidelity and ultra-high compression ratios using a hyperprior-driven deep learning toolkit.

bioRxiv · Oct 30, 2026 · PreprintBioengineering

Spotiphy enables single-cell spatial whole transcriptomics across the entire section

Jiyuan Yang, Ziqian Zheng, Yun Jiao, Kaiwen Yu, Sheetal Bhatara, Xu Yang, Sivaraman Natarajan, Jiahui Zhang, Qingfei Pan, John B. Easton, Koon‐Kiu Yan, Junmin Peng, Kaibo Liu, Jiyang Yu

Spotiphy transforms spatial transcriptomics data into single-cell-resolved whole-transcriptome images, revealing novel cellular compositions and spatial domains in Alzheimer's and breast tissue.

Nature Methods · Mar 12, 2025Peer-reviewedSystems Biology

Into the Void: Cavities and Tunnels are Essential for Functional Protein Design

Jiahui Zhang, Zhengxing Peng

This paper demonstrates that cavities and tunnels are essential for functional protein design and introduces a tool to analyze them.

bioRxiv · May 6, 2024 · PreprintBiophysics