Author
Cold Spring Harbor Laboratory
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
5 papers
Recent·Most cited
John Lee, Marcello Peppi, Megan Guidry, Katharine A. Fernandez, Abu Zaffar Chowdhury, Lizhen Wang, Lisa L. Cunningham
This study shows that reducing systemic cholesterol, either through statins or genetic models, protects against cisplatin-induced hearing loss by preserving cochlear outer hair cells.
bioRxiv · Sep 23, 2025 · PreprintNeuroscience
Benjamin D. Harris, John Lee, Jesse A Gillis
This study performs a meta-analysis of mouse bone marrow scRNA-seq data to identify cell type markers and functional signatures across hematopoietic development.
bioRxiv · Aug 12, 2021 · PreprintGenomics
Chiahsuan Chin, John Lee, Ranjith Ravichandran, Timothy P. Fleming, Stephen Bentley Wheatcroft, Mark T. Kearney, Ross Macrae Bremner, Thalachallour Mohanakumar, David J. Flint, Angara Sureshbabu
This study shows that IGFBP2 inhibits senescence and pulmonary fibrosis by suppressing P21 in aged mice, with epigenetic downregulation of Igfbp2 contributing to fibrosis.
bioRxiv · Jan 21, 2021 · PreprintMolecular Biology
Megan Crow, Hamsini Suresh, John Lee, Jesse A Gillis
The paper quantifies the conservation of gene coexpression patterns across 14 species to reveal conserved mechanisms of transcriptional cell identity.
bioRxiv · Nov 10, 2020 · PreprintBioinformatics
John Lee, Manthan Shah, Sara Ballouz, Megan Crow, Jesse A Gillis
CoCoCoNet identifies conserved gene modules and compares co-expression networks across 14 species, demonstrating conservation in nucleolus genes and translating autism mechanisms to model organisms.
Nucleic Acids Research · Apr 24, 2020Peer-reviewedBioinformatics