Author

M. Alonge

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

S. Soyk· 2 shared A. Hendelman· 1 shared J. He· 1 shared J. Van Eck· 1 shared L. Lebeigle· 1 shared M. Benoit· 1 shared M. C. Schatz· 1 shared M. Kirsche· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersPlant Biology

S. Soyk

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2 papers

Recent·Most cited

Establishing Physalis as a new Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome

J. He, M. Alonge, S. Ramakrishnan, M. Benoit, S. Soyk, N. Reem, A. Hendelman, J. Van Eck, M. Schatz, Z. Lippman

This paper establishes Physalis as a new Solanaceae model system by presenting chromosome-scale genomes and identifying genetic factors influencing floral traits and the Inflated Calyx Syndrome.

bioRxiv · Jul 29, 2022Plant Biology

Automated assembly scaffolding elevates a new tomato system for high-throughput genome editing

M. Alonge, L. Lebeigle, M. Kirsche, S. Aganezov, X. Wang, Z. B. Lippman, M. C. Schatz, S. Soyk

The paper introduces RagTag, a toolset for automating genome assembly scaffolding and patching, and establishes chromosome-scale references for tomato genotypes.

bioRxiv · Nov 18, 2021Plant Biology