P.-A. Gagnaire

The paper examines introgression between Ciona intestinalis and Ciona robusta in the English Channel, finding a hotspot of recent introgression linked to a cytochrome P450 gene.

This study shows that adult lifespan negatively correlates with genetic diversity in marine fish species, with vital rates explaining observed differences in genetic diversity.

The paper quantifies the relative contribution of genomic and epigenomic variation to convergent gene expression differences in four whitefish species pairs across continents.

The paper investigates convergent transcriptomic landscapes in limnetic and benthic whitefish species pairs across continents, finding shared genomic bases for differential gene expression under polygenic selection.

The paper examines how recombination affects local ancestry patterns in Brook Charr populations following hybridization, finding that deleterious mutations influence introgression dynamics.

The paper investigates how ancient admixture with a sister species contributed to reproductive isolation between Atlantic and Mediterranean lineages of European sea bass.

The paper identifies a genomic island showing parallel differentiation in seahorse lineages across different hybrid zones, suggesting a shared genetic barrier contributes to reproductive isolation in both spatial and ecological contexts.

This study uses Approximate Bayesian Computation to reconstruct the divergence history of European blue mussels, showing that binning strategies in site frequency spectra significantly affect results and that complex gene flow models are preferred.

The paper analyzes genome-wide differentiation between native and introduced populations of Crassostrea gigas and C. angulata, showing gene flow in Europe and genomic divergence patterns similar in Asia and Europe.

The paper identifies mechanisms behind the formation and remolding of genomic islands of differentiation in sea bass lineages using haplotype-resolved whole-genome sequences.

The paper models speciation-with-gene-flow in Lake Whitefish species pairs to infer divergence history and find recent asymmetrical secondary contact and heterogeneous genomic differentiation.