Author

Patrick Morris

Beaumont Hospital

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:perturbation response prediction· 1

Frequent Co-Authors

Alexander Vasiliev Gennadievich· 1 shared Andreas Schneeweiss· 1 shared Anna Gambaro· 1 shared Anton Antón-Torres· 1 shared Antonio Frassoldati· 1 shared Arvind RishiiD· 1 shared Balázs GyőrffyiD· 1 shared Barbara GalbardiiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Alexander Vasiliev Gennadievich

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Author profile →

2 papers

Recent·Most cited

Development and validation of a gene expression score to account for tumour purity and improve prognostication in breast cancer

Marco Barreca, Matteo Dugo, Barbara Galbardi, Balázs Győrffy, Luca Gianni, Giancarlo Bisagni, Marco Colleoni, Lucia Del Mastro, Claudio Zamagni, Mauro Mansutti, Milvia Zambetti, Antonio Frassoldati, Filippo Montemurro, Carmelo Bengala, Gabriella Mariani, , Maurizio Callari

This paper develops and validates a 9-gene Breast Cancer Purity Score to improve prognostication by accounting for tumour purity in breast cancer datasets.

npj Precision Oncology · Oct 24, 2024Peer-reviewedBioinformatics

DNA and RNA from the same single nucleus reveals interactions between genomic and transcriptomic landscapes in human tumor samples

Siran Li, Joan Alexander, Jude Kendall, Peter Andrews, Elizabeth Rose, Hope Orjuela, Sarah Park, Craig Podszus, Liam Shanley, Nissim Ranade, Patrick Morris, Danielle Stauder, Daniel Bradford, Michael Ronemus, Arvind Rishi, , Dan Levy

This study introduces hybrid BAG-seq to analyze DNA and RNA from single nuclei in tumor samples, revealing genome-transcriptome interactions and tumor heterogeneity.

bioRxiv · Oct 4, 2023 · PreprintGenomics