Author
BGI Group (China)
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
7 papers
Recent·Most cited
Yulong Qin, Yue Peng, Q Chen, Jialing Chen, Peidi Ren, Haohao Deng, Daxi Wang, Xin Liu, Zhihua Ou, Ziqing Deng, Xiaofeng Shi
STID provides a standardized framework for analyzing spatial transcriptomic data in infectious diseases, enabling pathogen background correction, niche identification, and multi-sample comparative analyses.
bioRxiv · May 27, 2026 · PreprintBioinformatics
Zhihua Ou, Zhaoyang Wang, Qi Chen, Peidi Ren, Xiuju He, Yan Liang, Yingan Liang, Jiaxuan Wang, Sha Liao, Dexin Wang, Jie Zhao, Oujia Zhang, Zhenyu Peng, Jianxin Su, Wangsheng Li, , Gong Cheng
This study uses spatial transcriptomics to show that cerebral vasculatures, particularly meninges, drive inflammation and tissue damage in Japanese encephalitis by forming a feedback loop involving immune cells and cell death mechanisms.
bioRxiv · Mar 6, 2025 · PreprintImmunology
Can Li, Na Xiao, Wenchen Song, Alvin Hiu-Chung Lam, Feifei Liu, Xinrui Cui, Zhanhong Ye, Yanxia Chen, Peidi Ren, Jian‐Piao Cai, Andrew Chak-Yiu Lee, Honglin Chen, Zhihua Ou, Jasper Fuk‐Woo Chan, Kwok-Yung Yuen, , Anna Jin-Xia Zhang
This study shows SARS-CoV-2 infection in hamsters causes persistent lung inflammation and alveolar-bronchiolization linked to Notch signaling dysregulation and potential cancer risk.
EBioMedicine · Sep 25, 2024Peer-reviewedMicrobiology
Yuee Zu, Zhihua Ou, Dan Wu, Wei Liu, Liwen Liu, Di Wu, Yanping Zhao, Peidi Ren, Yanqing Zhang, Wangsheng Li, Shujin Fu, Yongchun Wen, Xianchu Cai, Wenbo Liao, Chunyu Geng, , Junhua Li
The paper analyzes the genetic diversity of HPV types 16, 18, 52, and 58 in southern China, identifying sublineages and mutations associated with oncogenic potential.
Genomics · Sep 20, 2021Peer-reviewedGenomics
Yanqun Wang, Daxi Wang, Lu Zhang, Wanying Sun, Zhaoyong Zhang, Weijun Chen, Airu Zhu, Yongbo Huang, Fei Xiao, Jinxiu Yao, Mian Gan, Fang Li, Ling Luo, Xiaofang Huang, Yanjun Zhang, , Jincun Zhao
This study characterizes intra-host SARS-CoV-2 genomic variants and their evolutionary dynamics in COVID-19 patients using deep sequencing data.
Genome Medicine · Feb 22, 2021Peer-reviewedGenomics
Daxi Wang, Yanqun Wang, Wanying Sun, Lu Zhang, Jingkai Ji, Zhaoyong Zhang, Xinyi Cheng, Yimin Li, Fei Xiao, Airu Zhu, Bei Zhong, Shicong Ruan, Jiandong Li, Peidi Ren, Zhihua Ou, , Yonghao Xu
This study compares SARS-CoV-2 viral populations in COVID-19 patients to show narrow transmission bottlenecks and stochastic dynamics in intra-host and inter-host evolution.
Frontiers in Medicine · Feb 15, 2021Peer-reviewedGenetics
Minfeng Xiao, Xiaoqing Liu, Jingkai Ji, Min Li, Jiandong Li, Lin Yang, Wanying Sun, Peidi Ren, Guifang Yang, Jincun Zhao, Tianzhu Liang, Huahui Ren, Tian Chen, Huanzi Zhong, Wenchen Song, , Junhua Li
This paper compares amplicon, hybrid capture, and metatranscriptomic sequencing methods for directly sequencing SARS-CoV-2 genomes from clinical samples, finding differences in bias, sensitivity, and accuracy.
Genome Medicine · Jun 30, 2020Peer-reviewedGenomics