Qiuting Qian

RamiGlyph Captures Microglial Morphological Diversity and Predicts Functional States in Ischemia Reperfusion and Amyloid Pathology

Ensemble tests mask missing dynamics in protein conformational generators

The paper shows that ensemble tests can overstate evidence of learned dynamics in protein conformational generators by demonstrating that agreement with equilibrium ensembles does not ensure accurate dynamics.

Molecular dynamics descriptors for 1,079 post-translationally modified protein systems

The paper provides a resource of 1,079 post-translationally modified protein systems with molecular dynamics simulations and descriptors for research and method evaluation.

LNGCN: a distance-aware continuous-time graph framework for PPI prioritization in experimental screening

LNGCN improves PPI prioritization by using a distance-aware continuous-time graph framework, achieving high precision on imbalanced datasets and preserving residue-level representation diversity.

ProteinFlux: accurate, rapid and scalable generative prediction of protein dynamics driven by post-translational modifications

ProteinFlux predicts protein conformational dynamics influenced by post-translational modifications using a generative framework, outperforming traditional methods in speed and accuracy.