Author

R. Varma

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:metagenomics· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

A. E. Marin-Araujo· 1 shared C. Tataru· 1 shared G. Karoubi· 1 shared M. David· 1 shared Q. Pope· 1 shared S. Haykal· 1 shared S. Rostami· 1 shared T. K. Waddell· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 16 mutual co-author links

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1 shared paperBioengineering

A. E. Marin-Araujo

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Author profile →

2 papers

Recent·Most cited

Learning a deep language model for microbiomes: the power of large scale unlabeled microbiome data

Q. Pope, R. Varma, X. Fern, C. Tataru, M. David

This paper trains a self-supervised microbial language model on human gut microbiome data to improve prediction of IBD and diet patterns, showing better performance than baseline methods.

bioRxiv · Jul 17, 2023Microbiology

Pre-Clinical Application of Functional Human Induced Pluripotent Stem Cell-Derived Airway Epithelial Grafts

R. Varma, A. E. Marin-Araujo, S. Rostami, T. K. Waddell, G. Karoubi, S. Haykal

This study demonstrates the use of hiPSC-derived airway epithelial grafts for repairing tracheal defects in a pre-clinical model, showing successful integration and maintenance of epithelial function.

bioRxiv · May 18, 2021 · PreprintBioengineering