Author

Sandeep Kumar

University of Alabama at Birmingham

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Approach:experimental assay· 2 Research Focus:software / tool· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Organism:mouse· 1 Research Focus:protein design· 1 Assay:protein sequence· 1

Frequent Co-Authors

Arkadij KummeriD· 1 shared Dan Wu· 1 shared Eric J. MaiD· 1 shared Farbod MahmoudinobariD· 1 shared Hui-Ying Lim· 1 shared J. Wade DavisiD· 1 shared Konrad KrawczykiD· 1 shared Li QiangiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperBioinformatics

Arkadij KummerORCID

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Author profile →

3 papers

Recent·Most cited

A Turing-Style Test for In-Silico Antibodies: How Sampling Mode Makes WGAN-GP Beat VAE in the Wet Lab

Arkadij Kummer, Farbod Mahmoudinobar, Wendi Liu, J. Wade Davis, Eric J. Ma, Sandeep Kumar

This paper compares GANs and VAEs for generating viable antibody sequences, finding GANs outperform VAEs when sampling strategies are optimized.

bioRxiv · Sep 16, 2026 · PreprintBioinformatics

Protein Design Viz (PDV): lightweight protein structure visualization studio with validated quantitative analytics and antibody-specific toolkit

Konrad Krawczyk, Paweł Dudzic, Sandeep Kumar

PDV provides a lightweight, browser-based molecular visualization tool with validated quantitative structural analysis and antibody-specific features.

bioRxiv · Sep 8, 2026 · PreprintBioinformatics

Small molecule inhibitor of PPARγ acetylation promotes insulin sensitization and browning of white adipose tissue with improved safety

Dan Wu, Zhen Gong, Ying He, Sandeep Kumar, Venkateswararao Eeda, Qianfen Wan, Oana Herlea-Pana, Hui-Ying Lim, Wayne A. Hendrickson, Li Qiang, Weidong Wang

This paper identifies a small molecule inhibitor of PPARγ acetylation that improves insulin sensitivity and browning of white adipose tissue without the side effects of traditional PPARγ agonists.

bioRxiv · Dec 16, 2025 · PreprintCell Biology