Author

Si Qiu

BGI Group (China)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Organism:mouse· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Baosheng Li· 1 shared Bo LiiD· 1 shared Bo Li· 1 shared Caiyong YeiD· 1 shared Chao CheniD· 1 shared Chunlin Shao· 1 shared Chunmei Shi· 1 shared Congchong YAN· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperCancer Biology

Baosheng Li

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

FLASH X-rays preserve neutrophil chromatin to boost antitumor immunity

Xiaolin Shi, Si Qiu, Yiwei Yang, YongChao Jiang, Jianxin Wang, Xiaofeng Ding, Yufan He, Meiqi Lv, Hongyan Li, Qing Li, Baosheng Li, Zheng Zhou, Kui Zhou, Dexin Xiao, Peng Li, , Haowen Zhang

This study shows FLASH X-rays preserve neutrophil chromatin, reducing NET formation and enhancing antitumor immunity when combined with anti-PD-1 therapy.

bioRxiv · Oct 13, 2026 · PreprintCancer Biology

EPIP: MHC-I epitope prediction integrating mass spectrometry derived motifs and tissue-specific expression profiles

Weipeng Hu, Si Qiu, Youping Li, Xinxin Lin, Le Zhang, Haitao Xiang, Xing Han, Sitao Zhu, Lei Chen, Sha Li, Wenhui Li, Zhe Ren, Guixue Hou, Zhilong Lin, Jianliang Lu, , Leo J. Lee

EPIP predicts MHC-I epitope presentation by integrating mass spectrometry-derived motifs and tissue-specific RNA-seq data, outperforming existing methods in independent validation.

bioRxiv · Aug 24, 2020 · PreprintBioinformatics

Molecular profiles and mutation burden analysis in Chinese patients with gastric carcinoma

Chao Chen, Chunmei Shi, Xiaochun Huang, Jianwei Zheng, Zhongyi Zhu, Qiaolian Li, Si Qiu, Zhiqing Huang, Zhenkun Zhuang, Riping Wu, Panhong Liu, Fan Wu, Shanyun Lin, Bo Li, Xiuqing Zhang, Qiang Chen

This study analyzes molecular profiles and mutation burden in Chinese gastric carcinoma patients, identifying gene alterations and genomic regions linked to tumor burden and prognosis.

bioRxiv · Oct 23, 2018 · PreprintCancer Biology