Author

V. Caffier

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Pathology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:host-pathogen & immune response· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

B. Le Cam· 2 shared C. Lemaire· 2 shared J. Shiller· 2 shared L. Duvaux· 2 shared M. Sannier· 2 shared A. Feurtey· 1 shared B. Marie-Noelle· 1 shared B. Moury· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersEvolutionary Biology

B. Le Cam

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Author profile →

3 papers

Recent·Most cited

The quasi-universality of nestedness in the structure of quantitative plant-parasite interactions

B. Moury, J.-M. Audergon, S. Baudracco-Arnas, S. BEN KRIMA, F. Bertrand, N. Boissot, M. Buisson, V. Caffier, M. Cantet, S. Chaneac, C. Constant, F. Delmotte, C. Dogimont, J. Doumayrou, F. Fabre, , Y. Ruellan

The paper analyzes nestedness and modularity in plant-parasite interaction matrices and finds high nestedness in most cases, with limited modularity and links to resistance traits.

bioRxiv · Mar 3, 2021Pathology

Asian wild apples threatened by gene flow from domesticated apples and by their pestified pathogen

A. Feurtey, E. Guitton, M. De Gracia Coquerel, L. Duvaux, J. Shiller, M.-N. Bellanger, P. Expert, M. Sannier, V. Caffier, T. GIRAUD, B. Le Cam, C. Lemaire

The paper examines gene flow from domesticated apples to wild apples and the spread of a pestified pathogen, revealing hybridization and virulence changes in fungal populations.

bioRxiv · Apr 15, 2020 · PreprintEvolutionary Biology

Population genome sequencing of the scab fungal species Venturia inaequalis, Venturia pirina, Venturia aucupariae and Venturia asperata.

B. Le Cam, D. Sargent, J. Gouzy, J. Amselem, B. Marie-Noelle, B. Olivier, S. Brown, V. Caffier, M. De Gracia, R. Debuchy, L. Duvaux, T. Payen, M. Sannier, J. Shiller, J. Collemare, C. Lemaire

The paper reports whole genome sequencing of Venturia fungal species to understand their genetic structure and genomic features, revealing high transposable element content and clone relationships.

bioRxiv · Nov 27, 2018Plant Biology