Author

V. Timms

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:clustering· 1 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Research Focus:transcription & RNA processing· 1 Research Focus:variant calling· 1 Organism:virus· 1

Frequent Co-Authors

V. Sintchenko· 3 shared E. Sim· 2 shared R. Sadsad· 2 shared W. Fong· 2 shared A. Arnott· 1 shared C. Lam· 1 shared D. E. Dwyer· 1 shared E. C. Holmes· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersMicrobiology

V. Sintchenko

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Author profile →

3 papers

Recent·Most cited

Genomic evaluation of Bordetella spp. originating from Australia

W. Fong, V. Timms, E. Sim, V. Sintchenko

This study evaluates genomic changes in Bordetella spp. from Australia using long-read sequencing to close genomes and assess their relationship with global isolates.

bioRxiv · Mar 2, 2021 · PreprintMicrobiology

Comparison of library preparation and sequencing depths for direct sequencing of Bordetella pertussis positive samples

W. Fong, K. Pey, R. Rockett, R. Sadsad, V. Sintchenko, V. Timms

This study evaluates WGS library preparation methods for direct sequencing of B. pertussis clinical samples, finding that the Illumina DNA prep kit with deep sequencing detects vaccine antigen variations and macrolide resistance.

bioRxiv · Feb 14, 2021 · PreprintMicrobiology

REVEALING COVID-19 TRANSMISSION BY SARS-CoV-2 GENOME SEQUENCING AND AGENT BASED MODELLING

R. J. Rockett, A. Arnott, C. Lam, R. Sadsad, V. Timms, K.-A. Gray, J.-S. Eden, S. L. Chang, M. Gall, J. Draper, E. Sim, N. L. Bachmann, I. Carter, K. Basile, R. Byun, , V. Sintchenko

The paper uses SARS-CoV-2 genome sequencing and agent-based modeling to estimate local transmission rates during the early stages of the COVID-19 outbreak in New South Wales.

bioRxiv · Apr 19, 2020 · PreprintMicrobiology