henhaobio
Sign in

bioRxivImmunology

Healthy cells functionally present TAP-independent SSR1 peptides: implications for selection of clinically relevant antigens

A. A. de Waard, T. Verkerk, K. Hoefakker, D. M. van der Steen, M. L. M. Jongsma, S. Bliss, A. H. de Ru, P. A. van Veelen, M. Griffioen, M. H. M. Heemskerk, R. M. Spaapen

PDFDOIPreprint

Abstract

Tumors with an impaired transporter associated with antigen processing (TAP) present several ER-derived self-antigens on HLA class I (HLA-I) which are absent on healthy cells. Selection of such TAP-independent antigens for T cell-based immunotherapy should include analysis of their expression on healthy cells to prevent therapy-induced adverse toxicities. However, it is unknown how the absence of clinically relevant antigens on healthy cells needs to be validated. Here we monitored TAP-independent antigen presentation on various healthy cells using a new toolbox consisting of a T cell clone recognizing a TAP-independent SSR1-derived antigen. We found that most but not all healthy cells present this antigen under normal and inflammatory conditions, indicating that TAP-independent antigen presentation is a variable phenomenon. Our data emphasize the necessity of extensive testing of a wide variety of healthy cell types to define clinically relevant TAP-independent antigens that can be safely targeted by immunotherapy.

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISLozano-Rabe '23Li '18Roy '26Griswold '25Roberts '19Long '26
57% semantic matchCancer Biology
M. Lozano-Rabella, A. Garcia-Garijo, J. Palomero+16 more·Clinical Cancer Research·Feb 7, 2023