bioRxivBioengineering
A procedure for solid phase extractions using metal oxide coated silica column in lipidomics
H. Takeda, M. Takeuchi, M. Hasegawa, J. Miyamoto, H. Tsugawa
Abstract
Lipid enrichment is indispensable for enhancing the coverage of targeted molecules in mass spectrometry (MS)-based lipidomics studies. In this study, we developed a simple stepwise fractionation method using a titanium- and zirconium-dioxide-coated solid-phase extraction (SPE) silica column that separates neutral lipids, phospholipids, and other lipids, including fatty acids (FAs) and glycolipids. Chloroform was used to dissolve the lipids, and neutral lipids, including steryl esters and di- and triacylglycerols, were collected in the loading fraction. Second, methanol with formic acid (99:1, v/v) was used to retrieve FAs, ceramides, and glycolipids, including glycosylated ceramides and glycosylated diacylglycerols, by competing for affinity with the Lewis acid sites on the metal oxide surface. Finally, phospholipids strongly retained via chemoaffinity interactions were eluted using a solution containing 5% ammonia and high water content (45:50 v/v, 2-propanol:water), which canceled the electrostatic and chelating interactions with the SPE column. High average reproducibility of View larger version (34K): org.highwire.dtl.DTLVardef@170b451org.highwire.dtl.DTLVardef@4e4d3forg.highwire.dtl.DTLVardef@b1a1d4org.highwire.dtl.DTLVardef@1f77b31_HPS_FORMAT_FIGEXP M_FIG C_FIG
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Serial coupling of chromatographic columns having orthogonal selectivity to improve the coverage of oxidised lipidome for mass spectrometry analysis
A. Thakker, C. Spickett, A. Pitt·bioRxiv·Sep 12, 2019
- Human cerebrospinal fluid sample preparation and annotation for integrated lipidomics and metabolomics profiling studies
K. Hooshmand, J. Xu, … C. Legido-quigley·Molecular NeurobiologyPeer-reviewed·Oct 16, 2023
- Lipid extraction from dried blood spots and dried milk spots for high throughput lipidomics
S. Furse, A. Koulman·bioRxiv·Jun 22, 2020
- Optimizing Lipidomics Analysis Workflows for Biological Fluids and Extracellular Vesicles with Integrated Liquid Chromatography Tandem Mass Spectrometry Approaches
Adriana Ferreira Lopes Vilela, Miguel R. Patrício, … Carlos A. Sorgi·TalantaPeer-reviewed·Mar 1, 2025
- Comprehensive Lipidomic Characterization of Human Blood by High-Throughput UHPSFC/MS using Bioinert Column and Modified MTBE Extraction
Petra Peroutková, Robert Jirásko, … Ondřej Peterka·Analytica Chimica ActaPeer-reviewed·Feb 17, 2026
- A combined flow injection/reversed phase chromatography - high resolution mass spectrometry workflow for accurate absolute lipid quantification with 13C- internal standards
H. Schoeny, E. Rampler, … G. Koellensperger·bioRxiv·Nov 4, 2020