MCell4 with BioNetGen: A Monte Carlo Simulator of Rule-Based Reaction-Diffusion Systems with Python Interface
A. Husar, M. Ordyan, G. C. Garcia, J. G. Yancey, A. S. Saglam, J. Faeder, T. M. Bartol, M. B. Kennedy, T. J. Sejnowski
The paper introduces MCell4, a new version of the MCell simulation program with Python interface and BioNetGen support for rule-based reaction-diffusion modeling.
bioRxiv · May 17, 2022Biophysics