Author

Alex Pan

St. Mark's School of Texas

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Alice MazzagattiiD· 1 shared Altan M. TurkogluiD· 1 shared Carlos A. Pinzón-ArteagaiD· 1 shared Daniel A. SchmitziD· 1 shared Elizabeth D. KirbyiD· 1 shared Emily B. BallardiD· 1 shared Jiyeon K. DenningeriD· 1 shared Jun WuiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperDevelopmental Biology

Alice MazzagattiORCID

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2 papers

Recent·Most cited

Developmental BiologyCell ReportsPeer-reviewedOct 24, 2024

TASOR expression in naive embryonic stem cells safeguards their developmental potential

Carlos A. Pinzón-Arteaga, Ryan A. O’Hara, Alice Mazzagatti…·Jun Wu

This study identifies TASOR's role in maintaining developmental potential during the transition from naive to primed pluripotency by preventing L1 transposable element activation and subsequent cell death.

4 citations

humanDNA methylation

𝕏 PostBluesky

NeuroscienceFrontiers in Molecular NeurosciencePeer-reviewedJan 31, 2022

Robust transcriptional profiling and identification of differentially expressed genes with low input RNA sequencing of adult hippocampal neural stem and progenitor populations

Jiyeon K. Denninger, Logan A. Walker, Xi Xian Chen…·Elizabeth D. Kirby

This study compares bulk and single-cell RNAseq for identifying differentially expressed genes in adult hippocampal NSCs, finding single-cell methods miss high-fold-change genes but can be optimized for in vivo use.

20 citations

mousebulk RNA-seq

𝕏 PostBluesky