Author

Bo Xu

Chinese Academy of Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1 Genomics· 1 Molecular Biology· 1 Neuroscience· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:drug response / drug discovery· 2 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

Agata Zieba-Wicher· 1 shared Akinyemi Ojesina· 1 shared Ashley W. Jones· 1 shared Axel Klaesson· 1 shared Benjamin SchwessingeriD· 1 shared Binjie HongiD· 1 shared Carl-Magnus ClaussoniD· 1 shared Carolina WählbyiD· 1 shared

Activity by Year

2017-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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1 shared paperMolecular Biology

Agata Zieba-Wicher

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6 papers

Recent·Most cited

Deep ancestral structure, admixture and peripheral persistence shape diversity in the Papilio bianor species complex

Haolin Wu, Tonghang Wang, Bo Xu, Youhua Frank Chen

This study analyzes whole-genome variation in butterflies to show how ancestral polymorphism, admixture, and incomplete lineage sorting shape lineage diversity in the Papilio bianor complex.

bioRxiv · Sep 24, 2026 · PreprintEvolutionary Biology

BCIJelly: An integrated ecosystem for brain-computer interface research

Liyuan Han, Xinrui Yang, Tianyu Zheng, Qizhi Yang, Yitao Qin, Liang Chen, Qinglai Wei, Binjie Hong, Xinhe Zhang, Rui Xiong, Yong Gu, Mu‐ming Poo, Bo Xu, Chengyu Li, Tielin Zhang

BCIJelly provides a unified ecosystem for BCI research, standardizing data, integrating decoders, and enabling efficient deployment on neuromorphic hardware.

bioRxiv · Aug 20, 2026 · PreprintNeuroscience

Subchondral H-type Blood Vessel Formation Aggravates Articular Cartilage Degeneration through LEP-LEPR Axis

Chao Yu, Jun Qin, Xi Zhao, Shitong Luo, Hao Zeng, Bo Xu, Jingjing Li

This study identifies the LEP-LEPR-CD31 signaling pathway's role in subchondral H-type vessel formation and its contribution to articular cartilage degeneration in osteoarthritis.

Frontiers in Medicine · Mar 13, 2026Peer-reviewedPathology

Spatial mapping of proteins and their activity states in cancer models by multiplex in situ PLA

Liza Löf, Bo Xu, Tanay Kumar Sinha, Caroline Dahlström, Jonas Vennberg, Tore Larsson Forssén, Axel Klaesson, Carl-Magnus Clausson, Xuan Wang, Ulla Strömberg-Olsson, Masood Kamali‐Moghaddam, Christophe Avenel, Carolina Wählby, Agata Zieba-Wicher, Ulf D. Landegren

This paper introduces misPLA, a method for spatially mapping protein interactions and activity states in cancer models, revealing shared and disease-specific signaling patterns.

bioRxiv · Jul 11, 2025 · PreprintMolecular Biology

The stem rust fungus Puccinia graminis f. sp. tritici induces centromeric small RNAs during late infection that direct genome-wide DNA methylation

Jana Sperschneider, Ashley W. Jones, Jamila Nasim, Bo Xu, Silke Jacques, Narayana M. Upadhyaya, Rohit Mago, Melania Figueroa, Karam B. Singh, Eric A. Stone, Benjamin Schwessinger, Ming-Bo Wang, Jennifer M. Taylor, Peter N. Dodds

bioRxiv · Jul 9, 2020 · PreprintGenomics

Pathway-Structured Predictive Model for Cancer Survival Prediction: A Two-Stage Approach

Xinyan Zhang, Yan Li, Tomi Akinyemiju, Akinyemi Ojesina, Phillip Buckhaults, Nianjun Liu, Bo Xu, Nengjun Yi

The paper proposes a two-stage model that integrates pathway information into cancer survival prediction, improving accuracy compared to methods that ignore pathway data.

Genetics · Jan 1, 2017Peer-reviewedBioinformatics