Author

C. Nithin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

J. M. Bujnicki· 2 shared A. Horn· 1 shared A. Ko?cielniak· 1 shared A. Kurzynska-Kokorniak· 1 shared A. Salerno-Kochan· 1 shared A. Szczepanska· 1 shared D. Baranowski· 1 shared D. Gudanis· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersBiochemistry

J. M. Bujnicki

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Author profile →

3 papers

Recent·Most cited

Molecular insights into RNA recognition and gene regulation by the TRIM-NHL protein Mei-P26

A. Salerno-Kochan, A. Horn, P. Ghosh, C. Nithin, A. Ko?cielniak, D. Strauss, O. Rossbach, J. M. Bujnicki, M. Gaik, J. Medenbach, S. Glatt

This study determines the crystal structure of Mei-P26 NHL domain and identifies its RNA recognition mechanism and functional differences from related TRIM-NHL proteins.

bioRxiv · Sep 20, 2021Biochemistry

NCodR: A multi-class SVM classification to distinguish between non-coding RNAs in Viridiplantae

C. Nithin, S. Mukherjee, J. Basak, R. P. Bahadur

The paper develops NCodR, an SVM classifier that distinguishes seven classes of non-coding RNAs in plants using sequence and structure features, achieving ~91% average F1 score.

bioRxiv · Jan 23, 2021 · PreprintPlant Biology

RNA and DNA G-quadruplexes bind to human Dicer and inhibit its activity

N. Koralewska, A. Szczepanska, K. Ciechanowska, M. Wojnicka, M. Pokornowska, M. C. Milewski, D. Gudanis, D. Baranowski, C. Nithin, J. M. Bujnicki, Z. Gdaniec, M. Figlerowicz, A. Kurzynska-Kokorniak

This study shows that RNA and DNA G-quadruplexes bind to human Dicer and inhibit its activity by sequestering the Platform-PAZ-Connector helix cassette.

bioRxiv · May 5, 2020Biochemistry