Author

J. Basak

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Research Focus:clustering· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. Besra· 1 shared A. Kumar· 1 shared C. Nithin· 1 shared M. Roy Chowdhury· 1 shared R. P. Bahadur· 1 shared S. Mukherjee· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 6 mutual co-author links

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1 shared paperPlant Biology

A. Besra

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2 papers

Recent·Most cited

Elucidating role of long non-coding RNAs of Tamarindus indica Linn. in post-transcriptional gene regulation.

M. Roy Chowdhury, A. Kumar, A. Besra, J. Basak

This study predicts and validates 320 lncRNAs in tamarind, analyzing their roles in gene regulation and biological pathways.

bioRxiv · Apr 3, 2024 · PreprintPlant Biology

NCodR: A multi-class SVM classification to distinguish between non-coding RNAs in Viridiplantae

C. Nithin, S. Mukherjee, J. Basak, R. P. Bahadur

The paper develops NCodR, an SVM classifier that distinguishes seven classes of non-coding RNAs in plants using sequence and structure features, achieving ~91% average F1 score.

bioRxiv · Jan 23, 2021 · PreprintPlant Biology