Chi Zhang

Spatiotemporal coordination of specialized cerebellar networks supports episodic memory in older adults

The paper identifies specialized cerebellar networks in older adults and shows that dynamic functional connectivity patterns distinguish memory performance groups, with instability during encoding predicting retrieval slowing.

Catalase 2-dependent regulation of autophagy in response to carbon starvation in Arabidopsis

The paper investigates how catalase 2 regulates autophagy during carbon starvation in Arabidopsis by modulating redox-sensitive interactions with autophagy initiators.

Global O-GlcNAcome Identifies O-GlcNAcylated Proteins Regulating Oligodendrocyte Precursor Cells Differentiation

The paper identifies O-GlcNAcylated proteins in OPCs and shows their role in differentiation, with Vimentin as a key target.

Mitochondrial Retrograde Signaling in Arabidopsis thaliana: heterogenous, spatial and polarised aspects

This study uses single-nucleus and spatial RNA sequencing to reveal heterogeneous, spatial, and polarized mitochondrial stress signaling in Arabidopsis thaliana, showing how mitochondrial dysfunction reshapes cell identity trajectories.

RIPK3-dependent sequential recruitment of MLKL and RIPK1 drives PANoptotic cell death and chemokine production

This study identifies a RIPK3-dependent PANoptosome assembly mechanism that integrates pyroptotic, apoptotic, and necroptotic pathways, driving immunogenic cell death and chemokine production.

Permissive epigenetic landscape facilitates distinct transcriptional signatures of activating transcription factor 6 in the liver

The paper identifies Atf6 target genes and shows that a permissive epigenetic landscape allows distinct transcriptional responses to Atf6 activation in liver stress conditions.

LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on variant call format files

LDBlockShow visualizes linkage disequilibrium and haplotype blocks from VCF files efficiently, outperforming existing tools in speed and memory usage.

Principles of mRNA control by human PUM proteins elucidated from multi-modal experiments and integrative data analysis

The paper identifies how human PUM proteins regulate gene expression by RNA stability and develops a rulebook to predict functional PREs using machine learning.

A Simulation-Based Evaluation of Total-Evidence Dating Under the Fossilized Birth-Death Process

This paper evaluates total-evidence dating under the fossilized birth-death process through simulations, showing that fossil occurrences significantly impact node time and topology estimates.

QuickRNASeq: Guide For Pipeline Implementation And For Interactive Results Visualization

QuickRNASeq provides a pipeline for RNA-seq analysis and interactive visualization of results, automating tools to generate user-friendly reports.

A glance at recombination hotspots in the domestic cat

This study identifies and characterizes recombination hotspots in domestic cats using SNP data and Bayesian inference.