Author

D. Puiu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

J. Lu· 2 shared Y. Ge· 2 shared A. Gihawi· 1 shared A. Xu· 1 shared C. S. Cooper· 1 shared D. S. Brewer· 1 shared M. Pertea· 1 shared M. Revsine· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersCancer Biology

J. Lu

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2 papers

Recent·Most cited

Comprehensive analysis of microbial content in whole-genome sequencing samples from The Cancer Genome Atlas project

Y. Ge, J. Lu, D. Puiu, M. Revsine, S. L. Salzberg

The paper analyzes microbial content in 5,734 whole-genome sequencing samples from TCGA to provide a comprehensive reference dataset for future cancer microbiome studies.

bioRxiv · May 24, 2024Cancer Biology

Major data analysis errors invalidate cancer microbiome findings

A. Gihawi, Y. Ge, J. Lu, D. Puiu, A. Xu, C. S. Cooper, D. S. Brewer, M. Pertea, S. Salzberg

The paper re-analyzes a cancer microbiome study and identifies two major data and methodological errors that invalidate its findings and those of subsequent studies.

bioRxiv · Jul 28, 2023Cancer Biology