Author

D. Rae

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:metagenomics· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:differential expression· 1 Assay:fluorescence / live-cell microscopy· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

A. A. Pal· 1 shared A. Idris· 1 shared A. Luke· 1 shared B. T. Layden· 1 shared C. Choo-Kang· 1 shared C. Jeanes· 1 shared D. Gonzalez-Martinez· 1 shared D. J. Turner· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperBioengineering

A. A. Pal

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Gut microbiota and fecal short chain fatty acids differ with adiposity and country of origin: The METS-Microbiome Study

G. Ecklu-Mensah, C. Choo-Kang, M. G. Maseng, S. Donato, P. Bovet, K. Bedu-Addo, J. Plange-Rhule, T. E. Forrester, E. V. Lambert, D. Rae, A. Luke, B. T. Layden, S. O'Keefe, J. A. Gilbert, L. R. Dugas

This study examines how gut microbiota, short chain fatty acids (SCFAs), and obesity vary by country of origin and adiposity in a large African-origin cohort, finding significant differences in microbial composition and SCFA levels across populations.

bioRxiv · Mar 21, 2023Microbiology

Simple visualization of submicroscopic protein clusters with a phase-separation-based fluorescent reporter.

T. R. Mumford, D. Rae, E. Brackhahn, A. Idris, D. Gonzalez-Martinez, A. A. Pal, M. C. Chung, J. Guan, E. Rhoades, L. J. Bugaj

This paper introduces CluMPS, a fluorescent reporter that detects and amplifies submicroscopic protein clusters, enabling visualization of small oligomers and endogenous protein assemblies.

bioRxiv · Jul 13, 2022Bioengineering

Rapid Diagnosis of Lower Respiratory Infection using Nanopore-based Clinical Metagenomics

T. Charalampous, H. Richardson, G. L. Kay, R. Baldan, C. Jeanes, D. Rae, S. Grundy, D. J. Turner, J. Wain, R. M. Leggett, D. M. Livermore, J. O'Grady

This study develops a nanopore-based metagenomics pipeline for rapid and accurate diagnosis of bacterial lower respiratory infections, achieving high concordance with culture and fast turnaround time.

bioRxiv · Aug 9, 2018 · PreprintMicrobiology