Author

D. Vaneechoutte

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:Arabidopsis· 2 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:C. elegans· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1

Frequent Co-Authors

K. vandepoele· 3 shared A. Goossens· 1 shared A. Loraine· 1 shared A. R. Estrada· 1 shared D. G. Malat· 1 shared F. J. Molina Hidalgo· 1 shared F. Schweizer· 1 shared F. Van Breusegem· 1 shared

Activity by Year

2017-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersPlant Biology

K. vandepoele

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3 papers

Recent·Most cited

Integrative inference of transcriptional networks in Arabidopsis yields novel ROS signalling regulators

I. De Clercq, J. Van de Velde, X. Luo, L. Liu, V. Storme, M. Van Bel, R. Pottie, D. Vaneechoutte, F. Van Breusegem, K. vandepoele

The paper integrates multiple regulatory data types in Arabidopsis to build an iGRN that predicts gene regulatory interactions and identifies novel ROS signaling regulators.

bioRxiv · Aug 11, 2020Plant Biology

Subfunctionalization of paralog transcription factors contributes to regulation of alkaloid pathway branch choice in Catharanthus roseus

M. Colinas, J. Pollier, D. Vaneechoutte, D. G. Malat, F. Schweizer, R. De Clercq, J. G. Guedes, T. Martinez-Cortes, F. J. Molina Hidalgo, M. Sottomayor, K. Vandepoele, A. Goossens

The paper identifies subfunctionalization of ORCA transcription factors in Catharanthus roseus, revealing their role in regulating specific branches of the alkaloid pathway and their interaction with MYC2.

bioRxiv · May 4, 2020 · PreprintPlant Biology

Genome-Wide Characterization Of Differential Transcript Usage In Arabidopsis thaliana

D. Vaneechoutte, A. R. Estrada, Y.-C. Lin, A. Loraine, K. Vandepoele

The paper characterizes differential transcript usage in Arabidopsis thaliana using RNA-Seq data, identifying 138,722 isoform switches across 8,162 genes and showing 23% of these alter protein sequences.

bioRxiv · Sep 29, 2017Plant Biology