Author

F. Archer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Organism:chicken / avian· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

A. D. Foote· 2 shared J. O'Brien· 2 shared M. C. Fontaine· 2 shared M. Louis· 2 shared M. Nykanen· 2 shared O. E. Gaggiotti· 2 shared P. E. Rosel· 2 shared S. Berrow· 2 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersEvolutionary Biology

A. D. Foote

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters

M. Louis, P. Korlevic, M. Nykanen, F. Archer, S. Berrow, A. Brownlow, E. Lorenzen, J. O'Brien, K. Post, F. Racimo, E. Rogan, P. E. Rosel, M.-H. S. Sinding, H. van der Es, N. Wales, , A. D. Foote

This study uses ancient dolphin genomes to show rapid adaptation to coastal habitats through standing genetic variation and gene flow from coastal to pelagic populations.

bioRxiv · Nov 3, 2022Evolutionary Biology

Mycobacterial infection of precision cut lung slices reveals that the type 1 interferon pathway is locally induced by Mycobacterium bovis but not M. tuberculosis in different cattle breeds

A. Remot, F. Carreras, A. Coupe, E. Doz-Deblauwe, M.-L. Boschiroli, J. A. Browne, Q. Marquant, D. Descamps, F. Archer, A. Aseffa, P. Germon, S. V. Gordon, N. Winter

The paper uses precision-cut lung slices to compare immune responses to Mycobacterium bovis and M. tuberculosis in two cattle breeds, finding that M. bovis induces the type I interferon pathway while M. tuberculosis does not.

bioRxiv · Apr 16, 2021Immunology

Selection on ancestral genetic variation fuels parallel ecotype formation in bottlenose dolphins

M. Louis, M. Galimberti, F. Archer, S. Berrow, A. C. Brownlow, R. Fallon, M. Nykanen, J. O'Brien, K. M. Robertson, P. E. Rosel, B. Simon-Bouhet, D. Wegmann, M. C. Fontaine, A. D. Foote, O. E. Gaggiotti

The paper investigates how selection on ancestral genetic variation drives parallel ecotype formation in bottlenose dolphins by analyzing whole genomes of 57 individuals.

bioRxiv · Oct 5, 2020 · PreprintEvolutionary Biology