Author

F. Ponten

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

A. Backstrom· 1 shared A. J. Cesnik· 1 shared A. Mardinoglu· 1 shared A. Martin-Bernabe· 1 shared A. Mezheyeuski· 1 shared A. Portyanko· 1 shared B. Ayoglu· 1 shared B. Glimelius· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperCell Biology

A. Backstrom

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

The ratio of cytotoxic lymphocytes to M2-like macrophages is prognostic in immunogenic tumors

A. Mezheyeuski, M. Backman, J. Mattsson, A. Martin-Bernabe, C. Larsson, I. Hrynchyk, K. Hammarström, S. Ström, J. Ekström, S. Mauchanski, S. Khelashvili, M. Agnarsdottir, P.-H. Edqvist, J. Huvila, U. Segersten, , T. Sjöblom

The paper identifies a prognostic signature based on the ratio of cytotoxic lymphocytes to M2-like macrophages in tumor microenvironments, showing better survival prediction than existing immune scores in colon cancer and other high-mutation burden cancers.

bioRxiv · Mar 24, 2021 · PreprintCancer Biology

Spatiotemporal dissection of the cell cycle with single-cell proteogenomics

D. Mahdessian, A. J. Cesnik, C. Gnann, F. Danielsson, L. Akesson, M. Arif, C. Zhang, R. Schutten, A. Backstrom, P. Thul, N. Cho, O. Carja, M. Uhen, A. Mardinoglu, C. Stadler, , E. Lundberg

The paper maps spatiotemporal proteomic heterogeneity during the cell cycle using single-cell proteogenomics and identifies 235 cell cycle-associated proteins.

bioRxiv · Mar 26, 2020Cell Biology