Author

A. Mardinoglu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Physiology· 2 Cancer Biology· 1 Cell Biology· 1 Microbiology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Organism:human· 6 Research Focus:cell type annotation· 4 Research Focus:differential expression· 4 Approach:statistical model· 4 Assay:metagenomics· 3 Assay:bulk RNA-seq· 2 Research Focus:clustering· 2 Assay:metabolomics· 2

Frequent Co-Authors

M. Arif· 3 shared C. Zhang· 2 shared A. Backstrom· 1 shared A. Bayraktar· 1 shared A. Cakir· 1 shared A. E. Soylu· 1 shared A. G. O. Demir· 1 shared A. Gundogdu· 1 shared

Activity by Year

2020-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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3 shared papersPhysiology

M. Arif

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Multi-omics characterization of lymphedema-induced adipose tissue from breast cancer patients

S. Karaman, S. Lehti, C. Zhang, M.-R. Taskinen, R. Käkelä, A. Mardinoglu, H. Brorson, K. K. Alitalo, R. Kivelä

This study characterizes the molecular changes in adipose tissue from breast cancer patients with secondary lymphedema, finding distinct transcriptomic profiles compared to obesity.

bioRxiv · Nov 3, 2023 · PreprintPathology

Pathogenic entero- and salivatypes harbour changes in microbiome virulence and antimicrobial resistance genes with increasing chronic liver disease severity

S. Lee, B. Arefaine, N. Begum, M. Stamouli, E. Witherden, M. Mohamad, A. Harzandi, A. Zamalloa, H. Cai, L. A. Edwards, R. Williams, S. Chokshi, A. Mardinoglu, G. Proctor, D. L. Shawcross, , V. C. Patel

The paper identifies changes in oral and gut microbiome virulence and antimicrobial resistance genes associated with increasing severity of chronic liver disease.

bioRxiv · Aug 6, 2023 · PreprintPhysiology

Molecular profiling of high-level athlete skeletal muscle after acute exercise - a systems biology approach

S. M. Reitzner, E. B. Emanuelsson, M. Arif, B. Kaczkowski, A. T.-J. Kwon, A. Mardinoglu, E. Arner, M. A. Chapman, C. J. Sundberg

This study examines how acute exercise affects multi-omics profiles in skeletal muscle of trained and untrained individuals, revealing distinct metabolic and transcriptional responses based on training history and exercise type.

bioRxiv · Apr 11, 2023Physiology

Hexokinase 1b is a novel target for non-small-cell lung cancer

Y. Yozgat, E. Karakoc, O. Sahin, S. Cimen, W. M. Rabeh, M. S. Aydin, A. Mardinoglu, I. Gursel, A. Cakir, O. Sensoy, E. M. Ozdemir, Y. Bayrak, M. Z. Gunluoglu, O. Saatci, J. Jabbar, , M. A. Cevher

This study identifies HK1b as a novel therapeutic target in NSCLC by showing its role in glycolysis, tumor progression, and cisplatin resistance.

bioRxiv · Jun 27, 2022 · PreprintCancer Biology

Stratification of the Gut Microbiota Composition Landscape Across the Alzheimer's Disease Continuum in a Turkish Cohort

S. Yildirim, O. U. Nalbantoglu, A. Bayraktar, F. B. Ercan, A. Gundogdu, H. A. Velioglu, M. F. Göl, A. E. Soylu, F. Koc, E. A. Gürpınar, K. S. Kadak, M. Arikan, A. Mardinoglu, M. Kocak, E. Köseoglu, L. Hanoglu

This study identifies distinct gut microbiota community types across Alzheimer's disease stages using machine learning and 16S rRNA sequencing in a Turkish cohort.

bioRxiv · Oct 28, 2021Microbiology

Spatiotemporal dissection of the cell cycle with single-cell proteogenomics

D. Mahdessian, A. J. Cesnik, C. Gnann, F. Danielsson, L. Akesson, M. Arif, C. Zhang, R. Schutten, A. Backstrom, P. Thul, N. Cho, O. Carja, M. Uhen, A. Mardinoglu, C. Stadler, , E. Lundberg

The paper maps spatiotemporal proteomic heterogeneity during the cell cycle using single-cell proteogenomics and identifies 235 cell cycle-associated proteins.

bioRxiv · Mar 26, 2020Cell Biology