F. Roux

The Arabidopsis leucine rich repeat receptor-like kinase MIK2 interacts with RKS1 and participates to the control of quantitative disease resistance to the bacterial pathogen Xanthomonas campestris

This study identifies MIK2 as a key component of the RKS1-mediated quantitative disease resistance to Xanthomonas campestris in Arabidopsis through protein interaction and mutant analysis.

The Marchantia pangenome reveals ancient mechanisms of plant adaptation to the environment

This study analyzes the pangenome of Marchantia polymorpha to identify genetic features involved in plant adaptation to terrestrial environments, finding shared and lineage-specific genes with flowering plants.

Genome wide association study of Arabidopsis seed mucilage layers at a regional scale

This study performs a GWAS on Arabidopsis seed mucilage layers, identifying genetic variants and candidate genes associated with mucilage traits across natural populations.

Retrotransposon-driven environmental regulation of FLC leads to adaptive response to herbicide

The paper identifies a retrotransposon insertion in Arabidopsis FLC that increases environmental sensitivity, enabling an adaptive response to herbicide through epigenetic modulation.

Natural genetic variation underlying the negative effect of elevated CO2 on ionome composition in Arabidopsis thaliana

This study identifies genetic factors influencing the negative effect of elevated CO2 on ionome composition in Arabidopsis thaliana using genome-wide association mapping.

Epigenetic then genetic variations underpin rapid adaptation of oyster populations (Crassostrea gigas) to Pacific Oyster Mortality Syndrome (POMS)

This study shows that both genetic and epigenetic variations contribute to rapid adaptation of oyster populations to POMS, with epigenetic factors explaining a significant portion of phenotypic variation.

metaGE: Investigating Genotype-by-Environment interactions through meta-analysis

metaGE performs a meta-analysis of genome-wide association studies from multi-environment trials to identify genotype-by-environment interactions in plants.

The genetic architecture of adaptation to leaf and root bacterial microbiota in Arabidopsis thaliana

This study identifies host genetic factors shaping bacterial microbiota in Arabidopsis thaliana using genome-environment association analysis across multiple populations and environments.

Unraveling the genetic architecture of the adaptive potential of Arabidopsis thaliana to face the bacterial pathogen Pseudomonas syringae in the context of global change

The paper investigates the genetic basis of Arabidopsis thaliana's adaptive response to Pseudomonas syringae under climate change by identifying polygenic traits and QTL regions associated with disease resistance.

Investigating genetic diversity within the most abundant and prevalent non-pathogenic leaf-associated bacteria interacting with Arabidopsis thaliana in natural habitats

The paper investigates genetic diversity in non-pathogenic leaf-associated bacteria of Arabidopsis thaliana and finds significant intra-specific genetic variation and host responses.

Genome-wide association mapping within a single Arabidopsis thaliana population reveals a richer genetic architecture for defensive metabolite diversity

The paper conducts GWAS on a localized Arabidopsis thaliana population to uncover more genetic loci associated with defensive metabolites than previously found in broader panels.

Metabolic profile discriminates and predicts Arabidopsis susceptibility to virus under field conditions

This study identifies metabolic profiles that distinguish and predict Arabidopsis susceptibility to virus in field conditions.

Root microbiota assembly and adaptive differentiation among European Arabidopsis populations

The paper examines root microbiota variation in Arabidopsis thaliana across Europe, finding that climate drives adaptation more than soil conditions or microbial composition.

In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana

The paper examines the relationship between microbiota and pathobiota in Arabidopsis thaliana under natural conditions, finding a dynamic humped-back diversity relationship.