Author

Fen Xie

10X Genomics (United States)

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Bioinformatics· 1

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Research Focus:cell type annotation· 1 Organism:human· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

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Emre Erhan· 1 shared Erik M LehnertiD· 1 shared Fedor GrabiD· 1 shared Govinda M. Kamath· 1 shared Jeff Mellen· 1 shared Kevin Lydon· 1 shared Kristian CibulskisiD· 1 shared Mehrtash BabadiiD· 1 shared

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1 shared paperBioinformatics

Emre Erhan

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintOct 6, 2025

Accelerating scRNA-seq analysis: automated cell type annotation using representation learning and vector search

Stephen R. Williams, Fedor Grab, Govinda M. Kamath…·Nigel F. Delaney

This paper introduces a service for automated cell type annotation in scRNA-seq data using reverse search against a curated database, providing both fine-grained and coarse annotations without relying on predefined markers.

1 citation

humanscRNA-seq

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