Author

Florian Müller

Institut Pasteur

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Microbiology· 1 Pathology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Organism:chicken / avian· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

Agathe KahniD· 1 shared Albane A. BizetiD· 1 shared Alejandro BuschiazzoiD· 1 shared Alexandre BenmerahiD· 1 shared Alexia Mahuzier· 1 shared Amandine ViauiD· 1 shared Andreas W. SaileriD· 1 shared Asier Sáez‐CirióniD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperPathology

Agathe KahnORCID

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Author profile →

4 papers

Recent·Most cited

IMAGENE: Single-cell association of live cell imaging and gene expression profiles of non-adherent cells through photoactivatable adhesives

Maria Isabella Gariboldi, Chloé Sturmach, Solène Bernard, Christian Weber, Maël Gourvès, Yuki Umeda, Xueyang Li, Shinya Yamahira, Julien Fernandes, Asier Sáez‐Cirión, Satoshi Yamaguchi, Florian Müller

The paper introduces IMAGENE, a pipeline that links live cell imaging and gene expression in non-adherent cells using photoactivatable adhesives and machine learning.

bioRxiv · Jan 22, 2026 · PreprintBioengineering

Bacterial targeting of host paraspeckles uncovers a new SFPQ-based regulation

Sonia Nicchi, Sonia Mondino, Christophe Rusniok, Nassim Mahtal, Bertrand D. E. Raynal, Rayen Elj, Quentin Giai Gianetto, Joaquín Dalla Rizza, Nicole Larrieux, Jessica E. Martyn, Hanno Schoeler, Sandrine Schmutz, Florian Müller, Mariette Matondo, Alejandro Buschiazzo, , Monica Rolando

This study identifies L. pneumophila's LpDot1 protein as a bacterial effector that modifies SFPQ, disrupting paraspeckle organization and host splicing, leading to alternative splice variants of infection-related genes.

bioRxiv · Jan 12, 2026 · PreprintMicrobiology

A PLETHORA transcription factor shapes cucumber shoot architecture

Merijn H. L. Kerstens, Florian Müller, Kelvin Adema, Olga Kulikova, Magdalena Lastdrager, Ben Scheres, Viola Willemsen

This study investigates the role of CsPLT3/7 transcription factors in cucumber shoot development, finding conserved and diversified functions across species.

bioRxiv · Sep 18, 2025 · PreprintPlant Biology

The ANKS3/BICC1 protein complex is a master post-transcriptional regulator of NPHP1 ciliopathy gene transcripts

Alexia Mahuzier, Gweltas Odye, Valentina Grampa, Albane A. Bizet, Amandine Viau, Rebecca Ryan, Manon Mehraz, Thierry Blisnick, Euan Clark, Charline Henry, Rémi Piedagnel, Flora Silbermann, Gaëlle Hayot, Line De grande, Agathe Kahn, , Sophie Saunier

The paper identifies ANKS3/BICC1 as a post-transcriptional regulator of NPHP1 transcripts, linking it to ciliopathy phenotypes through transcript decay and ciliary dysfunction.

bioRxiv · Apr 18, 2024 · PreprintPathology