Author

Fredrick Sawe

Henry M. Jackson Foundation

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:multiome· 1

Frequent Co-Authors

Alec P. PankowiD· 1 shared Anna YsseliD· 1 shared Asanda Gwashu-Nyangiri· 1 shared Ashan DayanandaiD· 1 shared Aviva GeretziD· 1 shared Ben MurrelliD· 1 shared Bruna GalvãoiD· 1 shared Carlo SacdalaniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperMicrobiology

Alec P. PankowORCID

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2 papers

Recent·Most cited

Unique CD8+ T Cell Populations Expand during ART and Predict Delayed HIV-1 Rebound

Jie Wang, Gautam Kundu, Philip K. Ehrenberg, Aviva Geretz, Daina Eiser, Timothy Ezebuiro, Ashan Dayananda, Hiroshi Takata, Carlo Sacdalan, Somchai Sriplienchan, Nittaya Phanuphak, Suteeraporn Pinyakorn, Nelson L. Michael, Lydie Trautmann, Fredrick Sawe, , the RV254 study team

The paper identifies a unique CD8+ T cell population that expands during ART and predicts delayed HIV-1 rebound.

bioRxiv · Aug 18, 2026 · PreprintImmunology

Long-Read Deep Sequencing Reveals High Rates of Multilineage Transmission and Rapid Viral Population Changes in Acute HIV Infection

James I. Mullins, Wenjie Deng, Elena E. Giorgi, Craig A. Magaret, Morgane Rolland, Tanmoy Bhattacharya A, Dylan H. Westfall, Anna Yssel, Roger E. Bumgarner, Ben Murrell, Thumbi Ndung’u, Merlin Lee Robb, Raabya Rossenkhan, Paul T. Edlefsen, Krista L. Dong, , Carolyn E. Williamson

The paper uses long-read sequencing to study HIV transmission and population dynamics in acute infection, finding high multilineage transmission rates and rapid viral evolution.

Nature Communications · May 25, 2026Peer-reviewedMicrobiology