Author

J. J. Tree

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:E. coli· 1 Approach:experimental assay· 1

Frequent Co-Authors

D. G. Mediati· 2 shared A. Cain· 1 shared A. Pokhrel· 1 shared B. M. Sy· 1 shared C. N. I. Pang· 1 shared D. Lalaouna· 1 shared H. Dinh· 1 shared T. P. Stinear· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersMicrobiology

D. G. Mediati

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

The functional small RNA interactome of vancomycin tolerant Staphylococcus aureus

W. Wu, C. N. I. Pang, D. G. Mediati, J. J. Tree

The paper identifies sRNAs mediating translational repression in vancomycin-tolerant S. aureus, with RsaOI regulating HPr and Atl under cell wall stress.

bioRxiv · Aug 23, 2023 · PreprintMicrobiology

The 3'UTR of vigR is required for virulence in Staphylococcus aureus and has expanded through STAR sequence repeat insertions

D. G. Mediati, W. Dan, D. Lalaouna, H. Dinh, A. Pokhrel, T. P. Stinear, A. Cain, J. J. Tree

This study identifies the 3'UTR of vigR as critical for virulence in S. aureus, showing it regulates cell wall metabolism and interacts with mRNAs involved in virulence and antibiotic tolerance.

bioRxiv · May 16, 2023 · PreprintMicrobiology

Enterohaemorrhagic E. coli utilizes an AND-OR logic gate to regulate expression of an outer membrane haem receptor

B. M. Sy, J. J. Tree

This study shows EHEC uses an AND-OR logic gate to regulate chuA expression based on iron levels, temperature, and glucose availability.

bioRxiv · Aug 24, 2021 · PreprintMicrobiology