Author

J. Kacprzyk

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Plant Biology· 3 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Organism:Arabidopsis· 2 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

P. F. McCabe· 3 shared R. Burke· 3 shared C. V. Whelan· 2 shared Z. Huang· 2 shared A. McCabe· 1 shared C. Jiang· 1 shared C. Ng· 1 shared D. Douglas· 1 shared

Activity by Year

2023-2023 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersPlant Biology

P. F. McCabe

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

The polyamines spermine and spermidine inhibit or induce programmed cell death in Arabidopsis thaliana in vitro and in vivo in a dose dependent manner.

R. Burke, D. Nicotra, J. Phelan, P. F. McCabe, J. Kacprzyk

This study shows that spermine and spermidine regulate programmed cell death in Arabidopsis in a dose-dependent manner, acting as either inhibitors or inducers.

bioRxiv · Nov 15, 2023 · PreprintPlant Biology

Transcriptional signatures associated with waterlogging stress responses and aerenchyma formation in barley root tissue

O. L. Sherwood, R. Burke, J. O'Rourke, C. V. Whelan, F. Downey, L. Ryan, E. F. McCabe, Z. Huang, C. Ng, P. F. McCabe, J. Kacprzyk

This study identifies transcriptional signatures and candidate genes associated with waterlogging stress responses and aerenchyma formation in barley roots.

bioRxiv · Oct 6, 2023Plant Biology

Duplications of human longevity-associated genes across placental mammals

Z. Huang, C. Jiang, J. Gu, M. Uvizl, S. Power, D. Douglas, J. Kacprzyk

This study investigates the link between gene duplication and mammalian longevity by analyzing 287 human longevity-associated genes across 37 placental mammals, finding that duplication rates are eight times higher than contraction rates and identifying 43 genes significantly correlated with longevity.

bioRxiv · May 2, 2023Evolutionary Biology

Arabidopsis cell suspension culture and RNA sequencing reveal regulatory networks underlying plant programmed cell death.

R. Burke, A. McCabe, N. Ramesh Sonawane, M. Hasmukh Rathod, C. V. Whelan, P. F. McCabe, J. Kacprzyk

The paper uses RNA sequencing of Arabidopsis suspension cells to identify gene regulatory networks and key transcriptional regulators involved in plant programmed cell death and stress responses.

bioRxiv · Mar 14, 2023Plant Biology