Author

J. Lihavainen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 5 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Organism:plant (other)· 4 Research Focus:development & morphogenesis· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Assay:metabolomics· 2 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

P. Bag· 5 shared S. Jansson· 5 shared N. Fataftah· 3 shared K. M. Robinson· 2 shared N. Delhomme· 2 shared A. G. Ivanov· 1 shared B. Battersby· 1 shared B. Zhang· 1 shared

Activity by Year

2021-2022 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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5 shared papersPlant Biology

P. Bag

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

O2 photoreduction at acceptor side of Photosystem I provide photoprotection to conifer thylakoids in early spring

P. Bag, T. Shutova, D. Shevela, J. Lihavainen, S. Nanda, A. G. Ivanov, J. Messinger, S. Jansson

The paper shows that conifer thylakoids consume O2 via photoreduction at Photosystem I under cold, light conditions in early spring, providing photoprotection.

bioRxiv · Oct 21, 2022 · PreprintPlant Biology

Timing Is Everything In Autumn - Coordination Of Senescence Onset By A Transcriptional Program In Response To Environmental And Phytohormone Signals

J. Lihavainen, J. Simura, P. Bag, N. Fataftah, K. M. Robinson, N. Delhomme, O. Novak, K. Ljung, S. Jansson

The paper identifies a salicylic acid signaling pathway that fine-tunes senescence timing in aspen trees in response to environmental stress.

bioRxiv · Mar 30, 2022 · PreprintPlant Biology

Convergent evolution of mevalonate pathway in Inonotus obliquus and Betula pendula.

O. Safronov, G. Lutfullahoglubal, N. Sipari, M. Wilkens, P. Safdari, O.-P. Smolander, J. Lihavainen, N. Silvan, S. Rajaraman, P. K. Laine, L. Paulin, P. Auvinen, T. Sarjala, K. Overmyer, J. Kangasjarvi, , J. Salojarvi

The paper sequenced the Chaga mushroom genome and found lineage-specific whole genome duplication and Cytochrome P450 expansion, leading to complex terpene biosynthesis.

bioRxiv · Nov 28, 2021 · PreprintEvolutionary Biology

Nitrate fertilization may delay autumn leaf senescence, while amino acid treatments do not

N. Fataftah, E. Edlund, J. Lihavainen, P. Bag, L. Björken, T. Näsholm, S. Jansson

Nitrate fertilization delays autumn leaf senescence in Populus, while amino acid treatments do not, with distinct metabolic effects observed.

bioRxiv · Nov 9, 2021Plant Biology

An atlas of the Norway spruce needle seasonal transcriptome

P. Bag, J. Lihavainen, N. Delhomme, T. Riquelme, K. M. Robinson, S. Jansson

This paper presents a seasonal transcriptome atlas of Norway spruce needles using RNA sequencing, revealing gene expression patterns across different seasons and their biological implications.

bioRxiv · Jul 12, 2021Plant Biology

GIGANTEA gene expression influence leaf senescence in Populus in two different ways

N. Fataftah, P. Bag, D. Andre, J. Lihavainen, B. Zhang, P. K. Ingvarsson, O. Nilsson, S. Jansson

This study shows that altering GIGANTEA gene expression in Populus affects leaf senescence through two distinct mechanisms, independent of FT expression and environmental conditions.

bioRxiv · May 28, 2021Plant Biology