Author

J. P. Stack

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Plant Biology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:differential expression· 2 Organism:plant (other)· 2 Organism:bacteria (other)· 1 Research Focus:dimensionality reduction· 1 Assay:DNA methylation· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

M. Arif· 4 shared A. Larrea-Sarmiento· 2 shared A. M. Alvarez· 2 shared D. Arizala· 2 shared D. Jenkins· 2 shared F. M. Ochoa-Corona· 2 shared J. Fletcher· 2 shared J. Odani· 2 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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4 shared papersMicrobiology

M. Arif

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Author profile →

4 papers

Recent·Most cited

Genome-guided, field-deployable loop-mediated isothermal amplification (LAMP) assay for specific detection of Dickeya dadantii

S. M. Ludena, G. Tyagi, Z. Feng, E. Hampson, A. Adhikari, M. Minaai, L. Wong, M. Haubner, S. Dobhal, D. Arizala, S. A. Andreason, D. Mollov, F. M. Ochoa-Corona, J.-P. Bingham, J. Odani, , M. Arif

This paper develops a field-deployable LAMP assay for specific detection of Dickeya dadantii in plant materials, achieving high sensitivity and specificity with no false positives or negatives.

bioRxiv · May 4, 2024 · PreprintMicrobiology

Loop-mediated Isothermal Amplification (LAMP) assay for reliable detection of Xanthomonas axonopodis pv. vasculorum

M. Marabella, J. Howard, S. Bhandari, S. Do, M. Montoya-Pimolwatana, Y. Dou, S. Dobhal, D. Arizala, S. Montesinos, S. A. Andreason, F. M. Ochoa-Corona, J.-P. Bingham, J. Odani, D. Jenkins, L. M. Ma, , M. Arif

This paper develops a LAMP assay for detecting Xanthomonas axonopodis pv. vasculorum using the pelL gene, demonstrating high specificity and sensitivity for field use.

bioRxiv · Feb 7, 2024 · PreprintPlant Biology

Multiplex recombinase polymerase amplification (RPA) assay developed using unique genomic regions and coupled with a lateral flow device for rapid on-site detection of genus Clavibacter and C. nebraskensis

A. Larrea-Sarmiento, J. P. Stack, A. M. Alvarez, M. Arif

This paper develops a multiplex RPA assay with LFD for rapid, field-deployable detection of Clavibacter genus and C. nebraskensis in plant samples without DNA isolation.

bioRxiv · Aug 22, 2020Microbiology

Synergetic effect of non-complementary 5’ AT-rich sequences on the development of a multiplex TaqMan real-time PCR for specific and robust detection of Clavibacter michiganensis and C. michiganensis subsp. nebraskensis

A. Larrea-Sarmiento, A. M. Alvarez, J. P. Stack, M. Arif

This paper develops a multiplex TaqMan qPCR assay for detecting Clavibacter michiganensis and its subspecies by adding AT-rich sequences to primers, improving sensitivity and accuracy.

bioRxiv · Mar 11, 2019Plant Biology