Author

Jakob Kailer

University of Freiburg

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 1 Organism:human· 1 Assay:spatial transcriptomics· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Camila L. FullioiD· 1 shared Harald BinderiD· 1 shared Kiana FarhadyariD· 1 shared Laia Canal GuitartiD· 1 shared Maren HackenbergiD· 1 shared Niklas BrunniD· 1 shared Tanja VogeliD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Camila L. FullioORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintMar 20, 2026

Mapping spatial cell-cell communication programs by tailoring chains of cells for transformer neural networks

Niklas Brunn, Laia Canal Guitart, Kiana Farhadyar…·Harald Binder

The paper introduces scCChain, a transformer-based framework for mapping spatial cell-cell communication programs in spatial transcriptomics data, identifying hotspots at single-cell and spot resolution.

1 citation

humanspatial transcriptomics

𝕏 PostBluesky