Author

Jonathan A. Eisen

Primary ORCID profile (0000-0002-0159-2197 · 9 papers)Unclaimed ORCID profile · follow to get notified of new preprints

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Jonathan A. EiseniD9 papers · University of California, Davis

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:gene regulatory network inference· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

Alex Williams· 1 shared C.Y.M. Lau· 1 shared Duane Moser· 1 shared Eric D. Becraft· 1 shared Filipa Godoy Vitorino· 1 shared Jessica Jarett· 1 shared Joseph Brown· 1 shared Julia M. Brown· 1 shared

Activity by Year

2015-2017 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Alex Williams

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

MicrobiologybioRxivPreprintAug 15, 2017

Solagigasbacteria: Lone genomic giants among the uncultured bacterial phyla

Eric D. Becraft, Tanja Woyke, Jessica Jarett…·Ramunas Stepanauskas

The paper identifies Solagigasbacteria as a newly named candidate phylum with large genomes and versatile metabolism, found in diverse terrestrial ecosystems.

DOI 10.1101/176263

metagenomicswhole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivJul 10, 2015

Automated and accurate estimation of gene family abundance from shotgun metagenomes

Stephen Nayfach, Patrick H. Bradley, Stacia K. Wyman…·Thomas J. Sharpton

This paper develops ShotMAP, a metagenome annotation pipeline, and evaluates its performance on marine and gut microbiome data, finding functional differences in Crohn's disease patients.

DOI 10.1371/journal.pcbi.1004573

humanmultiple species

𝕏 PostBluesky